AMCG00015529


Basic Information

Item Value
gene id AMCG00015529
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10911450 ~ 10922530 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015529
ATGTTCCGACACGATCTGGGCTCGGACAACGTGCTGCACAAGCTGAACGCCACCGACAGGATCCAAGACGGGGAGCTGATCGAGGTGGTGCTGTCAGGCTCTGCCTCCCTGACTGAGCTGAAGCTCCGGCCCCACACCCTGGCCGTCCATTCGTATCGCACCCCCACCTTCTGTCACCACTGCGGGGAGATGCTGTGGGGCCTGGTACGCCAAGGGCTAAAGTgctGCGGACTGGACTTCCACAAGCGATGTGCCATCCGGATCCCCAGTGACTGCAGCCGGGCCAAGCGGCGGTGTGGTCCCAGCCTGTCCCTCTTCCCCACGGGACGTCCCAGGGCCCCTTCCCTCTCCACGCAGGCTGGAGGCAGCCTGGAAGAGATCAGCCAGTCCAAGGCAGGCCAGCGGGCCCGCGCACCCACGTGGACGGGGCATCCTGTGTGGTTTGACCAAGAGGGGGGCAGGGTGAGCGTGCCACACACCTTCCACATCCACACCTACACCCGGCCCACGGTCTGCCAGCACTGCCACAGACTCCTCAAGGGACTCTTCCGCCAGGGACTGCAGTGCTCTGACTGTAAGCTGAACTGCCACCGGCGCTGCGAACCCCTAGTGCCCAGCAACTGCCTGGGAGAGAAGAGTCCAGCCCTGCCTCTCCCGAGCGACAGCACGATGGTCAGAGCAGAGGGGGAGCCAAGCATGGAACAAAGCCCATTCACTGACCCGGAGGAGGCAGATCCACCGTCCCCGATCAGCAACATCCCACTGATGCGAGTGGTGCAGTCCATCCGGCAGACCAAGCGCCGGGACAGCACCGTGCTGAAGGAGGGCTGGCTGGTGCACCACACCTGCACTGACCCGCTGgagCTGTCACTCTCTGAGATCCTGCAGGTCAGAGGCCCCAGGCAGACGTGTGCCTCTACACCCTCTGAGTCCAGTGTCTACTCCTTTGAACTGGTCACCGACTCGCTGGTGTACTGTGTGTCAGAGGTCCAGACAGCTCCAGACGGGGGGTGGGAGCGGGCCATTCGTCAGGCCCTGATGCCCGTCCACAGCTCTGCCGACATGTGCATGGAGAGCCAGGGTGAGTctcggAAGGATATCAGCACAGTCTACCAGATCTTCGCAGACGAGGTCCTGGGATCAGGGCAGTTTGGGATCGTCTATGGAGGGGTGCACAGGAAGTCTGGGCGCAGCGTTGCAGTGAAGGCCATTGACAAGACCAGGTTTCCTACAAGGCAGGAACGCCAACTACGTAACGAGGTGGCCATCCTGCAGATCCTGGAGGCTCTGAGGTACCTGCACTTCAAAAGCATCGTCCACTGCGACCTCAAACCTGAGAACGTACTGCTGGCCTCCCCTGACCCCTTCccacagCTGAAGCTGTGTGACTTCGGCTTCGCACGTATCATTGGGGAGAAGTCGTTCCGCCGATCAGTGGTGGGCACCCCGGCCTACCTGGCTCCTGAGGTGATCAGCGCCCACGGGTACAACCGGTCCCTGGACATGTGGGCGGTGGGTGTGGTGCTCTACGTCAGCCTGAGCGGCACCTTCCCCTTCAATGAGGACGAGGACATCAGCCAGCAGATCCACAACGCAGAGTTCATGTACCCCGAGAAAATCTGGAGTCACATCTCCCCTGAAGCCATCAATCTCATCAATAACCTGCTGCAGGTGCCGGTGAATCGGAGGTTCAGTGTGGGCAAGGCTCTCAATCACCCCTGGCTCCAGGACTACCAGCTATGGTTGGACCTCCGGGAGTTTGAACTGCGCCAAGGCCATCGCTACCTCACCCACCCTGGAGATGAGTCTTGCTGGCAGCTACATGCCCAGGAGTGTGGCCTGCAGTACCCCCCCTACCTCCTGCTCAGGCAGGGCAAGACAGAGGACACTCCAAAGACGCACAGCCTAGGCCTTATAGACCACAGAGGGATACCAGAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015529 True 1941 mRNA 0.61 14 10911450 10922530

Neighbor

gene id symbol gene type direction distance location
AMCG00015520 LOC106560356 coding upstream 138886 10769384 ~ 10772564 (+)
AMCG00015521 NA coding upstream 169045 10739470 ~ 10742405 (+)
AMCG00015522 NA coding upstream 174475 10735359 ~ 10736975 (+)
AMCG00015516 NA coding upstream 285386 10613408 ~ 10626064 (+)
AMCG00015517 LOC100380650 coding upstream 307388 10567509 ~ 10604062 (+)
AMCG00015537 NA coding downstream 244757 11167287 ~ 11175559 (+)
AMCG00015538 NA coding downstream 414816 11337346 ~ 11342116 (+)
AMCG00015546 NA coding downstream 429441 11351971 ~ 11354018 (+)
AMCG00015547 NA coding downstream 431541 11354071 ~ 11356899 (+)
AMCG00015545 LOC105903120,LOC108434861,LOC107588129,LOC107753955,LOC107659720,LOC108267459,LOC106577530 coding downstream 444283 11366813 ~ 11370908 (+)
G98422 NA non-coding upstream 91280 10819748 ~ 10820170 (+)
G98398 NA non-coding upstream 202697 10708421 ~ 10708753 (+)
G98338 NA non-coding upstream 339560 10529960 ~ 10571890 (+)
G98312 NA non-coding upstream 414388 10496836 ~ 10497062 (+)
G98311 NA non-coding upstream 416499 10494524 ~ 10494951 (+)
G98430 NA non-coding downstream 1602 10924132 ~ 10938566 (+)
G98442 NA non-coding downstream 66326 10988856 ~ 11019109 (+)
G98569 NA non-coding downstream 544322 11466852 ~ 11468628 (+)
G98590 NA non-coding downstream 625035 11547565 ~ 11547819 (+)
G98625 NA non-coding downstream 1477203 12399733 ~ 12405119 (+)
G98402 NA other upstream 170317 10735979 ~ 10741133 (+)
G98302 NA other upstream 460787 10448166 ~ 10450663 (+)
AMCG00015504 NA other upstream 492750 10411887 ~ 10418700 (+)
G98251 NA other upstream 594125 10316908 ~ 10317325 (+)
AMCG00015492 NA other upstream 688954 10213001 ~ 10222496 (+)
AMCG00015539 NA other downstream 136960 11059490 ~ 11066855 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other downstream 435622 11358152 ~ 11416599 (+)
AMCG00015555 NA other downstream 1511636 12434166 ~ 12462665 (+)
G98759 NA other downstream 2053109 12975639 ~ 13046813 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 2501350 13423880 ~ 13429300 (+)

Expression


Co-expression Network