AMCG00015537


Basic Information

Item Value
gene id AMCG00015537
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 11167287 ~ 11175559 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015537
ACCGTGGAGCTGGCCAGCTTGGGCCGGCCCTTCCAGCTGGGCATGCTGTACGACTGCCGCCGGGATGTGCTAATTCCAGATTTCCAGATAATTTCTTCCGACTCCACCGAGGACAAAGCATCAGCTCTGAATGTCGAGGCGTCCCTGGAAGCAAGCTTCCTCTCCGGACTGGTCTCTGTGAAGGGCTCAGCCAGCTATTTACACGACAAGAAGACTTCGAAAAGGCAGTCGCGTGTCACCTTGCAGTATCGCACCACCACCAGGTTTGAGCAGCTCACTATGGACCACTTAGGAGCGGGAAACATACAATACCTTAATGTCTTTCAGGAGGGATCCGCTACTCATGTCGTGACCGCTATTCTGTATGGCGCACAAGCCTTTTTTGTCTTTGACAGGGAGGTGTCCTCAAGTGAAAACCACCAAGAGATCCAAGGCAGTTTACatgctgttattaaaaaaatcccTACGATATCAATCGAAGGCCAAGCATCCCTCAAAATGACAGACAAAGAGCGTGAACAGACAGACAAGTTCAGCTGTAAATTCTATGGGGATTTCGCTCTTGAGAACAATCCGGTGACATTTGAAGATGCCCTGAAGACTTATGCAGTTCTTCCACAATTGCTTGGCAAAGATGGAGAACAGGCCGTGCCCATGAAAGTCTGGCTTTACCCACTGACCAAGCTGGACTCTCAAGCAGCACAGATTGTCAGGCAGATCAGTATAGGGTTAGTTCGCCGTTCACAGCGTATTTTAGATGAACTGGATGATTGTGACGTACAGTGCAAGGATTTGATGAAAGACCCCACTGCTGTCCAGTTCCCTGAGATCAAACGCAAACTGCACAAGTTTAAGGACATGTGTTCAGAGTACAAGCTGGTCTTTCAGAAATCTCTGGCAAAACTTCTGCCCTCCATTCGTGGGGGTGGGGAAGAAGAAGGAAGTCTGGTTGATGTTGTGAACAGCAAAGAACGTTCTCCATTCCAGAATGTCCTGTTGACCGAATTCCTGGAAGACAAGGAGCGGGAGATGAACATGCTAAAATCTTACCTGCAGATTATGAACAACATTCCGGTTGTCTCCTCCAGTAGTGATCTGGACAAAATTGTGCTAGATGCAGTGAATGAGTATGTGCTGTGCTTTGCATTTACATCTTTAAAGCAAAGAGAACAATATTTAACTATCATGGAAAAGTATCTAATGACATCTGAAAAAGCAAAAGGTGAAGATTGGATATCCCAGCTAAGCCATGAACATGGTTCTGAAAAGTGGTTCAGATCAGTGGAGGTACCCACACTGACAAGGCAGAATATTCGATTATTCTTAGACTttgagaaagcaaacaaaagcagCCAGATTGTAAAGTTCTGTGTGGCTTCAATCAATGATGACATCAACATGGGATCTTCAGTTTATCTGTTTGAAAGGGGGGCTTTGGCAAGCAAGCATTTTGAGCTCCCGTCAAAGCCTGGTGTCCCAAAAGTACTGGGAAAAGAGCACGATCGCGTCCACTTACAGCTGCATCCTCCGAAGAATGGTGTCAATGAGATTGTGAAATATCGGGTTCTGTACCAGAAAATGCACGACTCCGTTTGGACAGAAGTAGATAGCAgtgacaaaacaacaaagtttACCGTGTCTGGCCTGGACCTCAATACTTCCTATCAATTCAGCTGCCAGGCAGTCTGCAAGCCAGGAGTTAGCTTCACCAGTGATGCATCAGATTACTGCAAGACACTGCCATCAAGCCCACCTGGAACTCCTCAACAGAAATCCTTAGGACCAAATGCCATCACCATTACTTGGGACATGCCTTTGTCAGTAGGAGAGGAAGTGAGTGTCATTGCCTATGAGGTTGAATACAGGGAGGGTAACAGCACTCCTCATGAGAATGAAACTCAAACATGGATTAAACTTAGAACCACAAGGAGAGAGTGCTCTCTGGAGAATTTAAAGGCAGGCAGTTCCTACATAATACGAATATCTTCAGATTGCGGCAAAGAAGGTAAAAGTCTACCAAGTGCAGTGATGGAAATAACAACTCCAAAAGATTCTGAAGCCAAGCCACAAGATGTAAGCCATATTGAAATACGGAGTGACCATTTCTTAAATTTCTCTGAATTAATACAGAAAGGGCAGCCTTCATTATATAGATTATCACTAGAAAAGGAACCTATGGTCAATGAATATTTCCAGGAGTACACATTTGGGAAGAAAGTAGAAGAAGGGAATAATAAAGTCATCATAGTTCTTGGAGCCACAGGAGCAGGGAAAACCACCCTGATCAATGCAATGATCAATTATGTACTGGGTGTGCAGTGGGGAGATCAATTTCGATACAAATTAATCCATGAGGACACCAACCGCTCTCAGGCTGAAAGTCAAACCTCTATAGTGACGTCCTATGAGCTCCACAACCAGAAGGGGTTCCTTGTCCCCTACTCTATTACAGTTATTGATACACCTGGGTTTGGAGATACCCGAGGACTTTCTCATGACAAGCTGATCACTGAGCAGGTGAAGCAATTTTTTTCCAATCCAGAAGGAGTGGATCACATCGATGCTGTGTGCTTTGTGGTACAGGCTTCGTTGGCTCGGTTGACTTCCATCCAGCAATATGTTTTTGACTCCATTCTTTCCATCTTTGGGAAAGATATTGCAGAGAACATTTTCGTTCTGGTCACATTTGTAGATGGAAAAGACATCCCTGTTTTGAGTGCCATTGAAGCCGCACAGTTGCCCTGCCACAAGAACCAAAAAGGGAAGCCAACTCATTTTGAATTCAACAATTCGGCCATGtacacacagaataaaatactGGAAAGTGATGCTGATGAGGAAGGCTCTGATGAGGATGAGGAATGTGTGGAAGATGACAACCAGCTGGAGAAGATTGTCTGGTCCTCAAATTTTAAGCAAATGAAAAAGTTTTTCAAAACCTTGGAAAAGGTAGAAGGAAAAGATTTAACATTGACCAAGAAAGTGCTGGAGGAGCGAGGGAGGCTGGAAATGGCCATGACCAAACTGCTGCCCCAGATCACAGCTGGGCTGGGAAAGATGAGTGAAATTAAGAAGATTAAGGAATGTCTGGAGAATGAGCAAGCCAACATGGAGCAAAACCAAAATTTTGAAACTGAGATTGTGGAACTAGTCCCAATAAGGCAACGTGCCAATCATATGTCAACAAACTGTAATGGTTGTCGAGTTTCATGTCATCAAGGATGTTTTCTTCCCAGTCAAGATACAATTGAAGTTTGTGCTGCCATGGATGATGAAGGAAATTGTGTAATCTGCCCAGGCCATTGCAACTACTCCTTACACTCACCTGAGATGTTCATATGGAAATATGAAGAGAAGAAAGTTAAGAAGACGGTCAAAGAGTTAAAGGATAACTTTGTTAAGGCTTCTGGAAAATTCATGTCAACAAAGGAGATGCTTGATAAACTTGAAGCTGACTTTCATAAGATTGAAGACAAAATTATGTGGTTAATCAGACTGTCTTCCAATTGTCTCGCTCGGCTGGAAGAAATTGCTTTAAAGCCAAACACTCTCTCCACAGTAGAGTACATCGATCTACTCATCCGCAACgaggaagaggaagggaaaCCCGGCTTTCAGGATCGTGTCTATGACCAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015537 True 3639 mRNA 0.44 3 11167287 11175559

Neighbor

gene id symbol gene type direction distance location
AMCG00015529 NA coding upstream 244757 10911450 ~ 10922530 (+)
AMCG00015520 LOC106560356 coding upstream 394723 10769384 ~ 10772564 (+)
AMCG00015521 NA coding upstream 424882 10739470 ~ 10742405 (+)
AMCG00015522 NA coding upstream 430312 10735359 ~ 10736975 (+)
AMCG00015516 NA coding upstream 541223 10613408 ~ 10626064 (+)
AMCG00015538 NA coding downstream 161787 11337346 ~ 11342116 (+)
AMCG00015546 NA coding downstream 176412 11351971 ~ 11354018 (+)
AMCG00015547 NA coding downstream 178512 11354071 ~ 11356899 (+)
AMCG00015545 LOC105903120,LOC108434861,LOC107588129,LOC107753955,LOC107659720,LOC108267459,LOC106577530 coding downstream 191254 11366813 ~ 11370908 (+)
AMCG00015543 sf1,LOC102786152,LOC106577532 coding downstream 201038 11376597 ~ 11392592 (+)
G98442 NA non-coding upstream 148178 10988856 ~ 11019109 (+)
G98430 NA non-coding upstream 228721 10924132 ~ 10938566 (+)
G98422 NA non-coding upstream 347117 10819748 ~ 10820170 (+)
G98398 NA non-coding upstream 458534 10708421 ~ 10708753 (+)
G98338 NA non-coding upstream 595397 10529960 ~ 10571890 (+)
G98569 NA non-coding downstream 291293 11466852 ~ 11468628 (+)
G98590 NA non-coding downstream 372006 11547565 ~ 11547819 (+)
G98625 NA non-coding downstream 1224174 12399733 ~ 12405119 (+)
G98731 NA non-coding downstream 1636917 12812476 ~ 12812692 (+)
G98831 LOC100846954 non-coding downstream 2038311 13213870 ~ 13214646 (+)
AMCG00015539 NA other upstream 100432 11059490 ~ 11066855 (+)
G98402 NA other upstream 426154 10735979 ~ 10741133 (+)
G98302 NA other upstream 716624 10448166 ~ 10450663 (+)
AMCG00015504 NA other upstream 748587 10411887 ~ 10418700 (+)
G98251 NA other upstream 849962 10316908 ~ 10317325 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other downstream 182593 11358152 ~ 11416599 (+)
AMCG00015555 NA other downstream 1258607 12434166 ~ 12462665 (+)
G98759 NA other downstream 1800080 12975639 ~ 13046813 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 2248321 13423880 ~ 13429300 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other downstream 2257492 13433051 ~ 13437147 (+)

Expression


Co-expression Network