AMCG00015549


Basic Information

Item Value
gene id AMCG00015549
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 11682291 ~ 11684136 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015549
ATGGCGAGCGGCTGGCGGAACAGAAGGGCCCTGCTGTGGCCCCTCGCCCTGGCGCTGGCCGGGGTGGCAGCCGCCGCGGCCCTGGAGTTCGGGGGGGCGCCGGGGCAGTGGGCGCGATATGGGCGCTGGGAGGCGGGCTCGGGAGGGGAGCTGAGCTTCAGCATGAAGACCAACGTCACCAAGGCGCTGGTGCTGTACCTGGACGACGGCGGTAACTGCGACTTCCTGGAGCTGCTGGTGGCGGGGGGGCGGCTGCAGCTGCGCTTCGCCATCCACTGCGCCGAGCCCGCCACCCTCCACATGGAGACCCCGGTGAACGATGACCGCTGGCACATGGTCCTCCTGACCCGCAACTACCGCGAGACCATGCTGGTGGTGGACAGCGAGGCCAAGGTTGCCGAAGTCAAGTCCAAGCGGCGGGAGATGGCCGTGGTCAGCGACCTCTTCGTGGGTGGCATCCCCCCCGACGTGCGCCTCTCCGCCCTCACCTCCAGCACCGTCAAATACGAGCCCCCCTTCCAGGGCCTGATCGCCAACCTCAAGGTGGGagagaccccccccaccctcctcaaCAGCCAGGGCATACAGAGCGATCTGGAGTATCTTTGCGCCAAGCAGAACCCCTGCCTGAACGGAGGCCTGTGTTCAGTGCAAAGAGGAGAGGTCTACTGCGACTGCGCGCTCACCCGCTACCGGGGAAAGTTCTGCAACGAAGGAGGAAATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015549 True 726 mRNA 0.67 2 11682291 11684136

Neighbor

gene id symbol gene type direction distance location
AMCG00015548 NA coding upstream 216410 11442221 ~ 11465881 (+)
AMCG00015542 NA coding upstream 267773 11393516 ~ 11414518 (+)
AMCG00015543 sf1,LOC102786152,LOC106577532 coding upstream 289699 11376597 ~ 11392592 (+)
AMCG00015545 LOC105903120,LOC108434861,LOC107588129,LOC107753955,LOC107659720,LOC108267459,LOC106577530 coding upstream 311383 11366813 ~ 11370908 (+)
AMCG00015547 NA coding upstream 325392 11354071 ~ 11356899 (+)
AMCG00015550 nrxn2,LOC106935608 coding downstream 257350 11941486 ~ 11944469 (+)
AMCG00015551 LOC106608688 coding downstream 310046 11994182 ~ 11998221 (+)
AMCG00015552 LOC106532321,LOC106577539 coding downstream 372078 12056214 ~ 12058714 (+)
AMCG00015553 LOC107572116 coding downstream 556400 12240536 ~ 12244228 (+)
AMCG00015554 nrxn2b,LOC102778344,LOC102303057,LOC106456332,LOC107679953,LOC107714885,LOC101464276 coding downstream 610968 12295104 ~ 12354720 (+)
G98590 NA non-coding upstream 134472 11547565 ~ 11547819 (+)
G98569 NA non-coding upstream 213663 11466852 ~ 11468628 (+)
G98442 NA non-coding upstream 663182 10988856 ~ 11019109 (+)
G98430 NA non-coding upstream 743725 10924132 ~ 10938566 (+)
G98422 NA non-coding upstream 862121 10819748 ~ 10820170 (+)
G98625 NA non-coding downstream 715597 12399733 ~ 12405119 (+)
G98731 NA non-coding downstream 1128340 12812476 ~ 12812692 (+)
G98831 LOC100846954 non-coding downstream 1529734 13213870 ~ 13214646 (+)
G98838 NA non-coding downstream 1572963 13257099 ~ 13259347 (+)
G98843 NA non-coding downstream 1576859 13260995 ~ 13262832 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other upstream 265692 11358152 ~ 11416599 (+)
AMCG00015528 NA other upstream 454470 10872670 ~ 11227821 (+)
AMCG00015539 NA other upstream 615436 11059490 ~ 11066855 (+)
G98402 NA other upstream 941158 10735979 ~ 10741133 (+)
G98302 NA other upstream 1231628 10448166 ~ 10450663 (+)
AMCG00015555 NA other downstream 750030 12434166 ~ 12462665 (+)
G98759 NA other downstream 1291503 12975639 ~ 13046813 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 1739744 13423880 ~ 13429300 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other downstream 1748915 13433051 ~ 13437147 (+)
G98884 NA other downstream 1761389 13445525 ~ 13447279 (+)

Expression


Co-expression Network