AMCG00015559


Basic Information

Item Value
gene id AMCG00015559
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 12494922 ~ 12497034 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015559
ATGGCAAACTGCTGCAACTGGGTGACACGGTTAATTCAGCCGTCAAGGAAAGTGACCTTAGTGACATTGGGTCTGGACAAAGCTGGAAAAACAGCAACTGTGAGATGCATTTTGGGCGAAAATCCAGAAGACGTGGCCCCCACCGTGGGCTTCTCCAAAATCTGCGTGAAGCAGGGGAAGTCTGAGGTGACCATCTTCGACTTGGGTGGGGGCAAGAGGATCCAAGGCATCTGGAAAAACTACTACGCCGAGTCGCACGGCATGGTGTATGTTGTGGACTCCAGCGATATGGAGCGCATCCAGGAGAACAAGAACACCCTGGCCGAGGTCCTGAGACACCCGCGCATCGCCGGGAAGCCTGTGCTTGTGCTGGCCAATAAGCAGGACTGTGAAGGGGCCTTGTGCGAGGCAGACCTCATCAAATCTCTCGCTCTGGAGAAGCTGATGAATGAGGACAAGTGTTGTCAGATTCAGCTGTGCTCGGCTGTGACAGGCAACGTGAGGAAACAGGACCAGTCCATTAAGAAGGGGCTGGCATGGCTGCTTAGCAGAATCGACAGGGACTATGCAGCCTTGAACGAGCGCGTGGAGAAAGACACGGCCGAGCAGAGGGCCCTGGAGGAGCAGGACAAGCGCGAGAGAGCTGAGCGAGTGCGCCAGGTTCGAGAAGAGcgggagcagagagagagggaggaggccGAGCGAGAGGGGAGGGCCAAGGAGGTCAAGCAgaaaagagagatggagaatgAACCAAGCCGTTGGCGGTTCCCCTGGCACTGGGGCTGGCGGAGGACATGCCCACTGACAACAGGCGCGGCAGAGGGGAGCAGTGAGAATGAGGACAAGAGGAgtagagagaaggagaagaagaagaaactgaGGCGGTTCCCCTGGCGCCGGGGCTGGCAGAGGACATGCCCACTGAAGACGGGCGTGGTGGAGGAGAGCAGCCCCCGGGAGGTCCACAGCGCTGTGTACAATATCTTCACAGCGACACAGAGCcgacaggaagagagagagcggCAGATCCTGGACGAGCCCCCAAAAGGTAACCCCACTCTGGGTAGTTGA

Function

GO: NA

KEGG:

id description
K07962 ARL13B, ARL2L1; ADP-ribosylation factor-like protein 13B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015559 True 1074 mRNA 0.58 2 12494922 12497034

Neighbor

gene id symbol gene type direction distance location
AMCG00015554 nrxn2b,LOC102778344,LOC102303057,LOC106456332,LOC107679953,LOC107714885,LOC101464276 coding upstream 140202 12295104 ~ 12354720 (+)
AMCG00015553 LOC107572116 coding upstream 250694 12240536 ~ 12244228 (+)
AMCG00015552 LOC106532321,LOC106577539 coding upstream 436208 12056214 ~ 12058714 (+)
AMCG00015551 LOC106608688 coding upstream 496701 11994182 ~ 11998221 (+)
AMCG00015550 nrxn2,LOC106935608 coding upstream 550453 11941486 ~ 11944469 (+)
AMCG00015558 NA coding downstream 57243 12554277 ~ 12565755 (+)
AMCG00015563 NA coding downstream 178208 12675242 ~ 12699160 (+)
AMCG00015564 NA coding downstream 233668 12730702 ~ 12740233 (+)
AMCG00015565 NA coding downstream 249448 12746482 ~ 12749068 (+)
AMCG00015567 NA coding downstream 291959 12788993 ~ 12791500 (+)
G98625 NA non-coding upstream 89803 12399733 ~ 12405119 (+)
G98590 NA non-coding upstream 947103 11547565 ~ 11547819 (+)
G98569 NA non-coding upstream 1026294 11466852 ~ 11468628 (+)
G98442 NA non-coding upstream 1475813 10988856 ~ 11019109 (+)
G98430 NA non-coding upstream 1556356 10924132 ~ 10938566 (+)
G98731 NA non-coding downstream 315442 12812476 ~ 12812692 (+)
G98831 LOC100846954 non-coding downstream 716836 13213870 ~ 13214646 (+)
G98838 NA non-coding downstream 760065 13257099 ~ 13259347 (+)
G98843 NA non-coding downstream 763961 13260995 ~ 13262832 (+)
G98876 NA non-coding downstream 890042 13387076 ~ 13391419 (+)
AMCG00015555 NA other upstream 32257 12434166 ~ 12462665 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other upstream 1078323 11358152 ~ 11416599 (+)
AMCG00015528 NA other upstream 1267101 10872670 ~ 11227821 (+)
AMCG00015539 NA other upstream 1428067 11059490 ~ 11066855 (+)
G98402 NA other upstream 1753789 10735979 ~ 10741133 (+)
G98759 NA other downstream 478605 12975639 ~ 13046813 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 926846 13423880 ~ 13429300 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other downstream 936017 13433051 ~ 13437147 (+)
G98884 NA other downstream 948491 13445525 ~ 13447279 (+)
AMCG00015602 NA other downstream 1079162 13576196 ~ 13613292 (+)

Expression


Co-expression Network