AMCG00015564


Basic Information

Item Value
gene id AMCG00015564
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 12730702 ~ 12740233 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015564
atgaaaatgggacTGGAAGTACACATCAggaactattgtatcctacagGCTGACGTGCCCTCGATCGCATTGCTGGGCTCTGGGGGGGGTCTGCGTGCCATGGTGGCTCTGATGGGTACGCTAAGTGAGCTGGGAGCCCAGGACTTGCTGGATTCAATCATGTACCTGTGTGGAGTATGTATGTCTTCTCTGTACAGCGATGAGAATTGGTCAACTCAAGTGGGGCAGAAAGAGTCTGAGATGGTACAGGCActcacaaatgaaaatatttcttTCCATGACATATTGACCAGGATAAATAAGGCATCCAACGATAGTAACTTCTCTCTGACAGATGTCTGGACTGCCCTGTTTGTTTATCCTGCTGTGAAATGGaaagaaacaaaatatgtttccGAGCAGACAGATGAGAAAATGGTGAATCCCTACCCAATCTATGCTGCCATTGACAGATGGAGACTAGAGAACAAAGATCAACATGACAAAGgAATCTGGTTTGAGATTACATGTCACAAATCAGGTTACCCTGGGTGTGGTGCCTTCGTAGAAACATCAAAGTTTGGCAGCTTTTTCAAAGAAGGGGAAATCCTTCAGCAGCAAGATGAGATGGATCTGCTGTACCTGCAAGTGGACCCCTCTGTGGAATGTCTGCTGTTACTGCTGGACCTGCATGAGGCCCTCAGTGATGGGACAGACTGCAAACACATTCTAAGCTCTTTAATGGTCCACCAGAAAGACCACAAGAAGGCACAGAAACTCATGCAACAGGTGCTGCACACATGGGACCTGAACAGCAAGGATACACCAAGGAAGTTGCTCTCCGACCTCTGCCAGGAAATGAGCTCATCATTTATAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015564 True 858 mRNA 0.47 6 12730702 12740233

Neighbor

gene id symbol gene type direction distance location
AMCG00015563 NA coding upstream 31542 12675242 ~ 12699160 (+)
AMCG00015558 NA coding upstream 164947 12554277 ~ 12565755 (+)
AMCG00015559 NA coding upstream 233668 12494922 ~ 12497034 (+)
AMCG00015554 nrxn2b,LOC102778344,LOC102303057,LOC106456332,LOC107679953,LOC107714885,LOC101464276 coding upstream 375982 12295104 ~ 12354720 (+)
AMCG00015553 LOC107572116 coding upstream 486474 12240536 ~ 12244228 (+)
AMCG00015565 NA coding downstream 6249 12746482 ~ 12749068 (+)
AMCG00015567 NA coding downstream 48760 12788993 ~ 12791500 (+)
AMCG00015566 NA coding downstream 119803 12860036 ~ 12874762 (+)
AMCG00015573 NA coding downstream 146626 12886859 ~ 12896411 (+)
AMCG00015572 NA coding downstream 162699 12902932 ~ 12907957 (+)
G98625 NA non-coding upstream 325583 12399733 ~ 12405119 (+)
G98590 NA non-coding upstream 1182883 11547565 ~ 11547819 (+)
G98569 NA non-coding upstream 1262074 11466852 ~ 11468628 (+)
G98442 NA non-coding upstream 1711593 10988856 ~ 11019109 (+)
G98430 NA non-coding upstream 1792136 10924132 ~ 10938566 (+)
G98731 NA non-coding downstream 72243 12812476 ~ 12812692 (+)
G98831 LOC100846954 non-coding downstream 473637 13213870 ~ 13214646 (+)
G98838 NA non-coding downstream 516866 13257099 ~ 13259347 (+)
G98843 NA non-coding downstream 520762 13260995 ~ 13262832 (+)
G98876 NA non-coding downstream 646843 13387076 ~ 13391419 (+)
AMCG00015555 NA other upstream 268037 12434166 ~ 12462665 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other upstream 1314103 11358152 ~ 11416599 (+)
AMCG00015528 NA other upstream 1502881 10872670 ~ 11227821 (+)
AMCG00015539 NA other upstream 1663847 11059490 ~ 11066855 (+)
G98402 NA other upstream 1989569 10735979 ~ 10741133 (+)
G98759 NA other downstream 235406 12975639 ~ 13046813 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 683647 13423880 ~ 13429300 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other downstream 692818 13433051 ~ 13437147 (+)
G98884 NA other downstream 705292 13445525 ~ 13447279 (+)
AMCG00015602 NA other downstream 835963 13576196 ~ 13613292 (+)

Expression


Co-expression Network