AMCG00015565


Basic Information

Item Value
gene id AMCG00015565
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 12746482 ~ 12749068 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015565
ATGCTGCTCTTACACATGCCTGTTCTGATAAATCCCTCTTCAGAGAATATTCTCCCCAGCGACCTGGTCCAAGATGAGAAGATTTACCTGATAGATGCTGGACTGTCCAATAACTGTGGCTACCCGCTAGTCCTGAGGCCAGAGAGACAAACAGTCCATCAAGCAGCAGAGTACTGTAAGAAGAACAGCATTCCCTTCCCAGACATCCCAGcagtgagtgaggaggagaaggcCTGTCCCTCAGACTGCTACATCTACAGAGGGAAGAACACGCCCACTGTGATGCATTTCCCTCTCTTCAACAGGGTCAACTGTGGAGACTCAAAGAAGATCAAGGCAATGGGGAAAACATACTGTACACGTAAAACGTCCTACAGCAAGAATGAGATACAAGCACTATTAAACAAGAGCAAGCATAACGTGCAGAACAACCATGACAAGATTGTCGCCGAGATACAGAAGGCTGTGGAGGCAGAATGGAAGAAGAACCAGAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015565 True 498 mRNA 0.47 3 12746482 12749068

Neighbor

gene id symbol gene type direction distance location
AMCG00015564 NA coding upstream 6249 12730702 ~ 12740233 (+)
AMCG00015563 NA coding upstream 47322 12675242 ~ 12699160 (+)
AMCG00015558 NA coding upstream 180727 12554277 ~ 12565755 (+)
AMCG00015559 NA coding upstream 249448 12494922 ~ 12497034 (+)
AMCG00015554 nrxn2b,LOC102778344,LOC102303057,LOC106456332,LOC107679953,LOC107714885,LOC101464276 coding upstream 391762 12295104 ~ 12354720 (+)
AMCG00015567 NA coding downstream 39925 12788993 ~ 12791500 (+)
AMCG00015566 NA coding downstream 110968 12860036 ~ 12874762 (+)
AMCG00015573 NA coding downstream 137791 12886859 ~ 12896411 (+)
AMCG00015572 NA coding downstream 153864 12902932 ~ 12907957 (+)
AMCG00015571 NA coding downstream 165598 12914666 ~ 12922985 (+)
G98625 NA non-coding upstream 341363 12399733 ~ 12405119 (+)
G98590 NA non-coding upstream 1198663 11547565 ~ 11547819 (+)
G98569 NA non-coding upstream 1277854 11466852 ~ 11468628 (+)
G98442 NA non-coding upstream 1727373 10988856 ~ 11019109 (+)
G98430 NA non-coding upstream 1807916 10924132 ~ 10938566 (+)
G98731 NA non-coding downstream 63408 12812476 ~ 12812692 (+)
G98831 LOC100846954 non-coding downstream 464802 13213870 ~ 13214646 (+)
G98838 NA non-coding downstream 508031 13257099 ~ 13259347 (+)
G98843 NA non-coding downstream 511927 13260995 ~ 13262832 (+)
G98876 NA non-coding downstream 638008 13387076 ~ 13391419 (+)
AMCG00015555 NA other upstream 283817 12434166 ~ 12462665 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other upstream 1329883 11358152 ~ 11416599 (+)
AMCG00015528 NA other upstream 1518661 10872670 ~ 11227821 (+)
AMCG00015539 NA other upstream 1679627 11059490 ~ 11066855 (+)
G98402 NA other upstream 2005349 10735979 ~ 10741133 (+)
G98759 NA other downstream 226571 12975639 ~ 13046813 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 674812 13423880 ~ 13429300 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other downstream 683983 13433051 ~ 13437147 (+)
G98884 NA other downstream 696457 13445525 ~ 13447279 (+)
AMCG00015602 NA other downstream 827128 13576196 ~ 13613292 (+)

Expression


Co-expression Network