AMCG00015566


Basic Information

Item Value
gene id AMCG00015566
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 12860036 ~ 12874762 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015566
TGAAGCCTGTGTTAGGTAATGGCTGCTCTCAGCCAGTGAATGAAATAAGCAAAGCAAGCTTATGGTAGCTGTTCAACTGTCTTAATGGTGCAAATCAATGAAAATGGACAGAGAAATTGTGATTCAAGCAgaagcaaaaaaggaaaagaaaatagtaAGAAAACTGTATCCTAATTCTTACTTGTTTAAAACATGGGGAGATGGCCTGTCAGAAGAACAGCAGAAGGAAGCAGAAGAGCTGTTTAACAAATATGGATACAATGCCTTTTTGAGTGACAGGCTATCGCTGAAAAGAGACCTCCCTGATACAAGACACCCCAGGTGCTTGGAGAAAACATATCCCAAAAATCTCCCTACTATCAGTGTGGTGCTGATTTACTTGGATGAAGCACTGTCTATATTAAAGAGAGCAATTCGAAGCATAATTGACAGAACACCGACACACCTATTAAAGGAGATTATACTGGTAGATGACCACAGCTCAAATGATACATTGGATGAGTACATCAGTTTCATACAAAAGGAGAATTCTGTACTGGTTACAAAAGTGAAACACAGTGAGCAGCTTGGACTAACACAAGCACGTGTTACTGGATGGAAGGCTGCAACAGGTGACGTGGTGGCCATTTTGGATGCTCACATTGAAGTTCATGTGGGATGGGCTGAGCCATTGCTTGCAAGAATTAAAGATGATCGCACAGTTGTGCTAACGCCTGTATTCGACAGAGTGAATTATGACACCTTAGAGGTCACAAAGTATAATCCAAATGCTGATGCCTTTGACTGGGCTTTGTGGTGCAAGTATGAGTCCTTTCAGCCAGACTGGTATAAGATGAATGATGAATCGCAACCAGGAAAGAGTCCTTCAATTATGGGTATCTTTggTCATGGCATAGACATTGGAGATATCTCTGAGAGAAAGAAACTCAAGGAGAGTCTGAAATGCAAACCATTCCAGTGGTATCTGGACAATGTATACCAGCAGTTggataatttaagtggtctactTGCCTATGGAGTTcTGAAGAATGATCTCAAGCAGGACATCTGTGTTGATCAAGGGCCTGTTCCTGGAAGTATACCCATACTGTATGGATGTCACTATCAATCTCCTCAGTTTGCCTACTACTTGAGCAGTGGAGAGATCTATATTGGAGGTTTAAAATCTCACAAATACGATAACCGTTGTTTAGTAGATCCCGGAACTGGCTCTAACCCAACTTTGATTGAATGCAAactggcaaaagaaaaaaagtttcatATGCACTGGGATTTTAAACAGggGAAGAGCATAAGGaatagagaaacaaaaagatGTCTTGAAATTGTTAAACATACCTACTACAATCTTATCGTTCAAGAGTGCACCAGCCAAATCTGGACATTTCAATATACAATCAAGGATTTTTAAGATAAAGTATGTTTGGAAAGACTTCAGCTTTACATACTAATCTAAAAagatttttcaatttgaatctgtgtttagtttttttctaattGCTCTCTGTATTGAGTGAATACTacaaaaaatgatacaaaatcaCACAACATAAGAGGGGTTCTACATTTGTGATTCAAAATTAGCTGGTAATAAATGCCTTGTTCTAAACCTTTGACAATGCCAGTTAGTGTTACAGTCAAACTGTGATTTAAGATTGAGTTATTGGGGAGCTAGCGAGCTTAAGATTGAGTTATTGGGGAGCTAGCGTGATTTctaaaatcatggttttatgcatctttacataTTACAATAGTGTATATGTAATGTACATAACACTTTTCTAGTTACAATCTATAAATTaatcaacaaaaaaagcaacattGCTGTGACAGGACGCCGTCTGTCACCGCACGGCTGTTGCTGATGCGCACtaattaggtgctcatgtgctgcaGCCTTATTGTCTGCTGCCTCTCAAACAGCCTGCGAGCTCTCAGCTGCAGGCAATGAGTACCGAGGCAATTGTGACGTCAGCACCAGCTGTGCTTCAGctatttaatctctctctctttccccgaAGTAGGACTGGCGCTCATGCCTTATAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015566 True 2046 mRNA 0.40 10 12860036 12874762

Neighbor

gene id symbol gene type direction distance location
AMCG00015567 NA coding upstream 68536 12788993 ~ 12791500 (+)
AMCG00015565 NA coding upstream 110968 12746482 ~ 12749068 (+)
AMCG00015564 NA coding upstream 119803 12730702 ~ 12740233 (+)
AMCG00015563 NA coding upstream 160876 12675242 ~ 12699160 (+)
AMCG00015558 NA coding upstream 294281 12554277 ~ 12565755 (+)
AMCG00015573 NA coding downstream 12097 12886859 ~ 12896411 (+)
AMCG00015572 NA coding downstream 28170 12902932 ~ 12907957 (+)
AMCG00015571 NA coding downstream 39904 12914666 ~ 12922985 (+)
AMCG00015576 NA coding downstream 117470 12992232 ~ 13011882 (+)
AMCG00015581 NA coding downstream 201537 13076299 ~ 13107013 (+)
G98731 NA non-coding upstream 47344 12812476 ~ 12812692 (+)
G98625 NA non-coding upstream 454917 12399733 ~ 12405119 (+)
G98590 NA non-coding upstream 1312217 11547565 ~ 11547819 (+)
G98569 NA non-coding upstream 1391408 11466852 ~ 11468628 (+)
G98442 NA non-coding upstream 1840927 10988856 ~ 11019109 (+)
G98831 LOC100846954 non-coding downstream 339108 13213870 ~ 13214646 (+)
G98838 NA non-coding downstream 382337 13257099 ~ 13259347 (+)
G98843 NA non-coding downstream 386233 13260995 ~ 13262832 (+)
G98876 NA non-coding downstream 512314 13387076 ~ 13391419 (+)
G98888 NA non-coding downstream 579125 13453887 ~ 13454126 (+)
AMCG00015555 NA other upstream 397371 12434166 ~ 12462665 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other upstream 1443437 11358152 ~ 11416599 (+)
AMCG00015528 NA other upstream 1632215 10872670 ~ 11227821 (+)
AMCG00015539 NA other upstream 1793181 11059490 ~ 11066855 (+)
G98402 NA other upstream 2118903 10735979 ~ 10741133 (+)
G98759 NA other downstream 100877 12975639 ~ 13046813 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 549118 13423880 ~ 13429300 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other downstream 558289 13433051 ~ 13437147 (+)
G98884 NA other downstream 570763 13445525 ~ 13447279 (+)
AMCG00015602 NA other downstream 701434 13576196 ~ 13613292 (+)

Expression


Co-expression Network