AMCG00015576


Basic Information

Item Value
gene id AMCG00015576
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 12992232 ~ 13011882 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015576
TCCTGATCCCGGAACTCGGGCTGGTGGGTAGGAATAGCTGTCTTTGTTTTGGTTCAGTATTTCAGTGAGGATAGCGATCTTTTACCTACTGGGGGTGCACTCACAGGTGAATCACGATGTCGGACTCTTCGGTGATGTTCCAAGCCCAGCTCTCCTCCGTCATGGAGATTCTCTTCAAAGCAGCCGTGTACGAGATCACCAAGGTGGTGGAGGGCAGTTTTTCTCACTTCCGTGTGGAGATCGCCCAGGTCAAGAAAGAGAACGAGAGCCTGAGGCTGAGGTTGCAGCTGTCGGAGGCCACGTCTACAGCAGAGCAGTGCTATGGGATCAGTCACATGGGGAAAACGGCACCTTCTGTAACCACACGCAGCATCGGGGTTCAGGTCTGTGAGGAGCACACCAGGAAAGAGTCGGGTGCCGGAATGAAGAGGAAACTTGTTCCAGTTGTGAAGGATGTGTTTGGCAAAGAGTGGTGCAGCAGTCTTTGGGAAGCCAAGGAGCCCAGAACGACAGGGTTTATAGCGGAATCTACAGACTCATGTCCTGTCCATTTTCCTGAGGAGGTGCCTGAGCTACTGGCTGTTCTCATTAAAGAGGAGATGAAAGAGCTTTGGGACCTCAATGttcattgcattttgtatgcatttgatGGACTCCCTGTTGTGATAACAAATGGAACAACTGCACATGGATTtgcagaaaaatacacaaatgtagaAAGCAATTTTGCTCTACATTGTCAGAAAGATGCTGCTGGTTTGCAACAGGGAGAACCAACCCGTAAAGAATTAAGAAATCAAGTTCAGGAACTCTTGAACAGGAAATACgCGGAAGCTGTGGGGTCGAATGATGTCAGGTTGCCTTACAAGCAGGTGGACAAAACAGTGTTTGCAACTGGTTTACCAGAAGGCATTACATTACAGAAGCCAAGCTTTTATGGCAAGGAAAAATTAAAGATGATTCTTCAGGAGGGAAACAACCTGAAAATCCATTTAAAAGAGATGATGACAGAGGTTGACAGTGTTATACCTAGAGTCTCAGCCCCCCAAGAGGTAGACAGCATCATGGCTATTGATACAGTCACAGGGAAAGGAGCACAACTTGTGGGTCGTGCATTCAAGTATCTGTGGAGTGTGGATACtgacaaagggaaaaaaattaagtggtTCCCTGGTGTTATAACTGGGTACAATGCCAAAAGTCAAAGATACTACATAAAGTATGATAATGGAGAGAAAGATGAGTTAGATGGCAGCATTGCTTCAAATAAGAGAATTTTTAGGCTTCGGAcctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015576 True 1295 mRNA 0.46 9 12992232 13011882

Neighbor

gene id symbol gene type direction distance location
AMCG00015571 NA coding upstream 69247 12914666 ~ 12922985 (+)
AMCG00015572 NA coding upstream 84275 12902932 ~ 12907957 (+)
AMCG00015573 NA coding upstream 95821 12886859 ~ 12896411 (+)
AMCG00015566 NA coding upstream 117470 12860036 ~ 12874762 (+)
AMCG00015567 NA coding upstream 200732 12788993 ~ 12791500 (+)
AMCG00015581 NA coding downstream 64417 13076299 ~ 13107013 (+)
AMCG00015584 NA coding downstream 99445 13111327 ~ 13112802 (+)
AMCG00015580 NA coding downstream 142636 13154518 ~ 13155953 (+)
AMCG00015583 NA coding downstream 156775 13168657 ~ 13171973 (+)
AMCG00015587 NA coding downstream 228309 13240191 ~ 13242891 (+)
G98731 NA non-coding upstream 179540 12812476 ~ 12812692 (+)
G98625 NA non-coding upstream 587113 12399733 ~ 12405119 (+)
G98590 NA non-coding upstream 1444413 11547565 ~ 11547819 (+)
G98569 NA non-coding upstream 1523604 11466852 ~ 11468628 (+)
G98442 NA non-coding upstream 1973123 10988856 ~ 11019109 (+)
G98831 LOC100846954 non-coding downstream 201988 13213870 ~ 13214646 (+)
G98838 NA non-coding downstream 245217 13257099 ~ 13259347 (+)
G98843 NA non-coding downstream 249113 13260995 ~ 13262832 (+)
G98876 NA non-coding downstream 375194 13387076 ~ 13391419 (+)
G98888 NA non-coding downstream 442005 13453887 ~ 13454126 (+)
AMCG00015555 NA other upstream 529567 12434166 ~ 12462665 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other upstream 1575633 11358152 ~ 11416599 (+)
AMCG00015528 NA other upstream 1764411 10872670 ~ 11227821 (+)
AMCG00015539 NA other upstream 1925377 11059490 ~ 11066855 (+)
G98402 NA other upstream 2251099 10735979 ~ 10741133 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 411998 13423880 ~ 13429300 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other downstream 421169 13433051 ~ 13437147 (+)
G98884 NA other downstream 433643 13445525 ~ 13447279 (+)
AMCG00015602 NA other downstream 564314 13576196 ~ 13613292 (+)
AMCG00015608 NA other downstream 869543 13881425 ~ 13884671 (+)

Expression


Co-expression Network