AMCG00015585


Basic Information

Item Value
gene id AMCG00015585
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13251013 ~ 13256153 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015585
CAGATATTTAACCCAGGCGTGCACGTCATTGCGTTTCATGTTTAGATTATACGGTAAAGATCACCGTCTCTCGCTCGGAAAGCGGAACCCGGCAGTGTATACATGTGCGTGTTTGCGTGCGCCCGTATTTATGGGAAGACAAACACACCAAACGTCTGTTACGACGctttcttaaaaacaacaaaacaaccacGCAAGCCTCCGCGACTGAGCTCCCCGGGATCACGTTTAGGTGGCGATCTCTGCCGCACGGAAGAAGCCCCACCATGTCGGACTCCGTGGCCACTTTTCAGTCGCAGCTCACATCCGTCATGGAGAGTATGGTGCGGGCGGCGATCTACGAGATCACCAAGCTGTACGAGAGCAGCTTTGCGGGCTTCCAGGTGGAAATCGCCCAGAGCAAGAAGGAGATCCAGGCTCTGAGGAGGAGGCTGCCGCTGCCGGAGAGCCAACCGAGGGGCGGCACGAACAAAGCGAGGAAGTCGGCGCCTCCCGCGAATAGCAGCCGCTGCGTCGGCGTGCAGGATGGCGAGGGTACCCCGGGCGGGGAGCCCAGAGAGGCGGCAGCTGGAACCCGGAGAGACAGTCCTCCCCTGATAGATAGAGTATTTGACCAAGACTGGGGCAGCAATCTCTGGGGAACTGGAGAGCCCAGGTCTGAGGAGGCTGGAGAGGAAGTGACTGGACTGTATCCCGCCAACTCTGCTGAGGAATTGGCTGAAGTGGTGTCTGTCATCATTAAAGAGGAGTCTGCTGATATCGAAGAGAACAGGCCCCAGCGGATCCTTATCAAAGATGAGGGATCCAGGGAGGACTCGGACAGCAGTGACGCACAAGGGCGAGGGAGGATCCGCAGGAGACGGTATGGCGACACTGATATGGATAGAGGGGATTCCACCAGCACTGGGGAAAAGGACGGTAAGAACGAGACACTGGCAGCTGAAATGGAGGAGGCGGGTATTCGTAATGCGCCACCAAGACCCCCTTTGGGAACGCCTTACATCAACGTGGAGTTGAACGGTTGGGATTTTGTCCCCACGAAACAGGACATCGAACTGTGGTCTACGCGCTGTGACGAGGACAGAACCCAGATGGAACACATCCAGCAGGAGGCCTTGGCGGGCGGGGAGCAGAAGATCAGGAAGCGCATCTCTCAGGAGTTCACAAAGACTCTCTcagccagagaggaggagggtCCGTTGTTGCAGGCTGTGCCACAACACGGATCCTCCAGCACCCTCCTGCCTCCACTACCGACAAACGTGAATGAAGCGGAGCCCAGTGCCAATATTGAGGGCTGCTACCCTTGCACGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015585 True 1316 mRNA 0.57 4 13251013 13256153

Neighbor

gene id symbol gene type direction distance location
AMCG00015587 NA coding upstream 8122 13240191 ~ 13242891 (+)
AMCG00015583 NA coding upstream 79040 13168657 ~ 13171973 (+)
AMCG00015580 NA coding upstream 95060 13154518 ~ 13155953 (+)
AMCG00015584 NA coding upstream 138211 13111327 ~ 13112802 (+)
AMCG00015581 NA coding upstream 144000 13076299 ~ 13107013 (+)
AMCG00015590 NA coding downstream 73429 13329582 ~ 13337434 (+)
AMCG00015588 NA coding downstream 95363 13351516 ~ 13366130 (+)
AMCG00015597 NA coding downstream 245490 13501643 ~ 13516584 (+)
AMCG00015600 NA coding downstream 342133 13598286 ~ 13607255 (+)
AMCG00015607 NA coding downstream 432937 13689090 ~ 13716822 (+)
G98831 LOC100846954 non-coding upstream 36367 13213870 ~ 13214646 (+)
G98731 NA non-coding upstream 438321 12812476 ~ 12812692 (+)
G98625 NA non-coding upstream 845894 12399733 ~ 12405119 (+)
G98590 NA non-coding upstream 1703194 11547565 ~ 11547819 (+)
G98569 NA non-coding upstream 1782385 11466852 ~ 11468628 (+)
G98838 NA non-coding downstream 946 13257099 ~ 13259347 (+)
G98843 NA non-coding downstream 4842 13260995 ~ 13262832 (+)
G98876 NA non-coding downstream 130923 13387076 ~ 13391419 (+)
G98888 NA non-coding downstream 197734 13453887 ~ 13454126 (+)
G98881 timm10,LOC107746912,LOC107674252,LOC107556822 non-coding downstream 201976 13458129 ~ 13459786 (+)
G98759 NA other upstream 204200 12975639 ~ 13046813 (+)
AMCG00015555 NA other upstream 788348 12434166 ~ 12462665 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other upstream 1834414 11358152 ~ 11416599 (+)
AMCG00015528 NA other upstream 2023192 10872670 ~ 11227821 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 167727 13423880 ~ 13429300 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other downstream 176898 13433051 ~ 13437147 (+)
G98884 NA other downstream 189372 13445525 ~ 13447279 (+)
AMCG00015602 NA other downstream 320043 13576196 ~ 13613292 (+)
AMCG00015608 NA other downstream 625272 13881425 ~ 13884671 (+)

Expression


Co-expression Network