AMCG00015600


Basic Information

Item Value
gene id AMCG00015600
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13598286 ~ 13607255 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015600
TTCTCCCACCTGTGCCCTCGGTCTCTTCCCGTTTCAAAACAGCAGCTCCCAGCATGGTCTCCACTTAAACCCAGTAACCGCTTTTATTTTACGACTCTGTTAAACCAGACTCGGGTTTCGAGAGGAGAGCCGAGTGTTCCCGACGACGAACGAGGAAGGAAAAGTCCTCAGGATGGAGGGACAAAAGGAGGTATTGGAGCGACTGCGCCGCTCGTTCGAGGGGGGTCGGACACGGGGGGCGAAGTACCGGAGGGGGCAGTTGGAAGCGGTGGTGAAGCTTATACATGACAATGAGGCGGCCATACTGGAGGCCCTGCATAGAGACCTGCGCAAGgGTGGTAACTGTGCCATTCTGAAGCCATCAGAAGTCAGTGGAGCCACAGAGAAGCTACTGGCTGAACTGGTCCCCAAATACCTGGACCAGGACTGCTATGCGGTGTTGTGCGGGGGAGCTGAGGAAACCAAAGATTTACTGAAGAACAGATTTGACCACATCTTCTATACAGGCAAGAGCCCCtgtgtgttgtggggggggCTGGACATCCCCTCCGCCGCTCGCCGCCTTGCCTGGGCCAAGTTCTTCAATGCCGGCCAGAGCTGCGTGGCCCCGGACTACGTGCTGTGCCACCCTAAGATTGTTGAACCCCTCCTGGCGGCCCTCAAGGTGACCCTGGAGGAGTTCTATGGCGCCCAGCCCCGGGAGTCGCCCCACTATGGCAGAATGGTGGCTGACCGCCACTGGGACCGAGTGAAGGGGCTGCTGGAGAGGAGTCAGGGGAGGGTGGCCATTGGGGGAGATAGCGACAAGGAGGACAGGTACATAGTGCTGGTGGATGTCGATGAGTCAGACTCTCTGATGGAAGAGGAGATCTTTGGGCCTGTGTTGCCCATTCTGACCATCCCCTCGCTGGACAGCGCTGTGGTTACCACGGTGCTGGAGCGTGCCAGTAGTGGGGGGTTCTGCTCCAACGATGGTATGGTCCAAATGACTTTACCTGGCCTGCCATTTGGAGGTGTAGgtgctAGTGGGATGGGCCGGTACCATGGGCGCTGGGGCTTCGACACATTCTCGCACAGCCGGGCGGTGATGCTGCGGGGGTGGGGCCTGGAGCGGGTCAATGTGCTGCGCTACCCCCCCTACACCCCCCCGCGGCTGAGCTGGCTGCGTTGGGCCACCACCATCTCTCGCAAGGACGGGTGGGGCTGCTCTGTCATGTGACTCTGAGACACCCATACTGATATTAAAACCACTGATATACTGACACTAGTGCTGATAATACTGACTGTAACACTGTTTCTCACGAGTGACGGTGGCTgacagtctgtctctctgtgataCTGACACTCTGTCTCCCTCTTGTGGTTTGTATGCTTTATTGTTGTCTAATCAGTGACTCTACTGtactttattgtgtgtgtgtgtgcatttgtctCGTTCCTtctcagtcagtgtatcagtatTGTTATGCACTATATTTACCCTCTGTCTATTTTTGGTCCAATCAGTGGAAGGTATTTTCTTGTTTACACTaatcatcttaataaaaattaacctttaaaacaaataattacatgaaaCTACTGGAAACCctctatatttaaatgttacagtACAGTTGCTTCAGTCAGTACTTGGACTCCAGGtgtacatacagtacagtgtcgTTACCTGGTTAATCTATACAGTATAGTGGctatatgttttttataaaaaatgttaatgaaacaaacattttggtGTAAATACAATGGGAACTTTAACTATTTGCTTTATTAAACACTGTTTACTATTATAGACATTTACTTcctattacaaatatattgtttaaagcTAATATTGAAATGATAAATGTGTATATCAATATTTTGGTGTGTGGGgcaaaaataaagcagcaa

Function

GO:

id name namespace
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015600 True 1896 mRNA 0.50 9 13598286 13607255

Neighbor

gene id symbol gene type direction distance location
AMCG00015597 NA coding upstream 81702 13501643 ~ 13516584 (+)
AMCG00015588 NA coding upstream 232156 13351516 ~ 13366130 (+)
AMCG00015590 NA coding upstream 260852 13329582 ~ 13337434 (+)
AMCG00015585 NA coding upstream 342133 13251013 ~ 13256153 (+)
AMCG00015587 NA coding upstream 355395 13240191 ~ 13242891 (+)
AMCG00015607 NA coding downstream 81835 13689090 ~ 13716822 (+)
AMCG00015609 NA coding downstream 195226 13802481 ~ 13821972 (+)
AMCG00015610 LOC100701608,LOC103356189,LOC108412483,LOC103470774,LOC103146641,LOC102233014 coding downstream 225340 13832595 ~ 13834746 (+)
AMCG00015616 NA coding downstream 378288 13985543 ~ 13993089 (+)
AMCG00015617 NA coding downstream 482712 14089967 ~ 14096267 (+)
G98901 NA non-coding upstream 571 13579724 ~ 13597715 (+)
G98889 NA non-coding upstream 81857 13493782 ~ 13516429 (+)
G98881 timm10,LOC107746912,LOC107674252,LOC107556822 non-coding upstream 138500 13458129 ~ 13459786 (+)
G98888 NA non-coding upstream 144160 13453887 ~ 13454126 (+)
G98876 NA non-coding upstream 206867 13387076 ~ 13391419 (+)
G98918 NA non-coding downstream 183787 13791042 ~ 13810939 (+)
G99053 NA non-coding downstream 310340 13917595 ~ 13918028 (+)
G99056 NA non-coding downstream 317993 13925248 ~ 13933503 (+)
G99068 NA non-coding downstream 444240 14051495 ~ 14065138 (+)
G99070 NA non-coding downstream 456674 14063929 ~ 14109320 (+)
G98884 NA other upstream 151007 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 161139 13433051 ~ 13437147 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other upstream 168986 13423880 ~ 13429300 (+)
G98759 NA other upstream 551473 12975639 ~ 13046813 (+)
AMCG00015555 NA other upstream 1135621 12434166 ~ 12462665 (+)
AMCG00015608 NA other downstream 274170 13881425 ~ 13884671 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other downstream 489690 14096945 ~ 14100855 (+)
AMCG00015657 NA other downstream 1441668 15048923 ~ 15200978 (+)
G99475 NA other downstream 1706781 15314036 ~ 15314414 (+)
G99541 NA other downstream 2189695 15796950 ~ 15801634 (+)

Expression


Co-expression Network