AMCG00015607


Basic Information

Item Value
gene id AMCG00015607
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13689090 ~ 13716822 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015607
ATGGCGCAACAGAAGGGAAGTGGGCGTGTCTATCAGACTGTCCCCTGGCTCCTCCCGCTCCTCCTCCTTTCCCCTCTATCTTGGCAATTTGagctgcaggaggaggACTGGCCTCTGCTGAGGTCGGACCTGCGTACTCTGCACAGTCTGGAGGGGCTGGCGGAACGAACCACTTATGGAAAGGAGGAGGcgggggagatggagagagttgAGTCCAGaaatGCCGCTGGATTAGGTAACAGGTTCCTGAAGCAGCCCATGAGTCTGTTAGATGATCTAAAAGGATGCCAGAACTATGCCCAGTGTCTTTCCGATCATAATCAGGATTTCAATGAATTCCTTCGTGAAATTGAGAGGCAGAGAGCGACAGACACTCTGCTGTCTGCGTCTGAGGTCTCCAGCTCATATTACCTCAAAGTCCTTCTGATGCTGGATGAGGAGACAGAGACATATAGGAAGGCGATGGAGGAGTACAGCCTggaccctgactggtctgtccTGGTCAATCCGGCCTGCTTGGCCAATGACACCTGCCTGCCCATAGCTGACCTCTACACTTTGGTGAAAGTGATTGGCAAGACCAACAATCCTGACCATTCCTTGTCTGGCTACACGGGTTCGAAGTTGGCCAAGCTGCTTCTGCGACCAGCCTTcagaaatgcagggctctactCCCTGGGGAATAGCACTGTGCCAGCTTTGAGATCTTACCTCCTGAATGACCTTAAATTGCATGGGAGGGATGCAGTGGTGGAGACAGAGGGAAACAACAAGGTGTTCTACCATACACTGGACAGGGACGGCTGTCCCACTAAGCTCTACAAATCAAAAACAGCCACTGACCCCAACACACGCTATGACAAGCAGcacattgtcatgctggaagaTGACACAGTAGCAAGGGAGGCTGCCCAGTTCCTGTTTGAGAAGCACCCCACTGTGTCCACCCTCTATGTCCTGGAGAATGGGCTCCCAAAGCGGATCAAGGGGCAGCTGGGCTCCCTGACTGAGGACAGTCGGCTGGTGCTGGTGGGACATGGGAGGAAGAATGGGGTGAGCGGAGAGACCAGGCTGGGGGGGTATGGGGCGCAGGACATAGCAGAGATTGTGAGCCGAGTGCCGAGGGAGGGGGTACAAATTAAGACAGTGAGTGTGGTGGGCTGTGATGTGGGGAAGGATCAAACATTTGTGGATGCCCTCCTTCGGGAGCTCCGGACCAGACAAGTAGAAACTGAGCTCCACCTGAGGAGCTCCCTTGTTGAGGTCAGACACTCAGGTGAGAAAGTCACTGCTGAGCTGACGCCCTTGGGGCTAGAGTACAGACTCAAGGATGCCAGCAAGAAAGTGGTAGCTAAGCTGGACAGGGAGGGGAGGACCATTACCATAGAGGAACCTGGAGAAAGAGGTAGGGTGGTTTACAGTGACAAAAGGAATTTCCTGATGAATCAAGCCAAAGATCAGAAACAACTCCAAAACTGGGAGAATTTCAAAATCGAATGGCCAAATAGACCACTGAAGTTTGTAGACCAAAACATGCGTATGGAGAGCACTGATGTTCTTGAAGGCCTAGCCTGGGCCTTTTTTAAAGATGTCAAGGGGAGAGCACCACTTGCAGTCTACGATCTTAGGAATGAGCACTATGTCCTTAAAGAGAGTGAGATGAGTTCTTGGCTCAAAAATAATGAGATCGAGGAGGTTTTGAAGCACTGCCGTAAGATCAACACAGCCGAGGATCTAGTGAAGGAAATCCACCACAATGCCAGGATTGGAGAAACAGAGAACACGTATTACAATTTACAGGACTGGATTTACCAGGTGAACCCCAGGAATCTATATGTGTATTTAGTGGGGAAGAAGTTAAGGACAGAAGTGGACACCGAGCAGGTAAAAAGACTATTAGAAAATCAAATCCAAGCAGTCAACAACCAAATTCCTCCTATAAATTGGGAGGAGGTGAGAAAGGCTTCCAATTTAGAGACTGTCAAAAGCCTACTGAGAAGtcatttttctaaaacaaagtTTAAAGTGGTCAAAGACATTCTCAACAAAAATAGTATCTTCAAAGTAGATGTGAAGAATAAAGAAGAGGTGAAGAATATCATAGATGGTCACAAAGATAAGGAGAAATATCCAGACATCCGTGGAAACATAAAAGAACAGGATCTCCTTATGCCTGTGTCAGAGATTGGCCGAATTGAGAGTGTGATTCAAAAGTGTGTGGTCAATCAAAGAAGATTACAGATGAACAAGCAGGCAAACCGAGGCAAAACAGTGAAAGAGTTCCTTCACCAGCAGTATCCGTATCGTTATAACAAAATACGCAATGAGGTCAATATGGAGGACTACGTCAGATACATAAAGGATACTTTACAGGGGGGTTACCAGTCAGGGCTGCACTCTCTAGAAAAGGAGTCATGGCTGGGGAGGTACTTCATGGCATCTGTTTTTGCCGAATCTGCTCGCAATTTCCGAACCTTCCCCGTGATCCTGATGGCTTTGGATGGCTACCAGAATGGACAGAACCATGAGTTCATCACGTTCCTATTTGATGAACACCCAATGGCCAGGGGGGGCACCTGGGTGGATTCCAGTCGACGAGGGTTCTGGGGTTCCAGTCGTACAGAGAAATCAAGTAAATTATATAACATGATAAATCGAAAGACAGAACGTGAACTACAAATGGACCTGAGCAATTTAATactgagggaaaataaaatctacactAAATGGCTTGCTCAGAATCAGGGCCAAGAAGAATTTAATAGTTTGCTGGAAAGTCTTAATCAAGCATACAGGGACAAACAGAAAGAGACTATCAGGACTTCTTATGAGGAATTTAAAGATATCATCAATAGAGACCCACAAGACAGTATGTCATCCGGCCACTTCCTTGGGGGTGCAGATGATGGAGTTGTCACTGCCCACGATCTTCTGTCTGCATCGGGGACGGAGCATTCCCTAGAGCTCTCGGCCTATCACTCTCGAGCCAAGGTAGTCCTGAGTAGGCAGATCCACGAGAAGCTGCAGGTGCATTTCAGAGGAGAAAGAGCAGGAGAGTACTCTGTGGACCCCAAGTCCGTCCGTGTAGAAGAGGGACAGTTCAGATGTCAGCTGATTTCCCAGAAGTCTCCTGGGAGGAACTTGGAGTGGGCTGTGAAATTGAACACAGAGGGGCTGAAGCACATGGAGAAAGTCTTGGAGATGATCCAGGAAGTGGGCAGCACAGAGATTTCAGAGAGGGGCAACCCCCTGCATGTCTCTGAGCACTTGGAACGAACAGGGAAAGCAGTTGCAGTGGTTGGGCTGATGTTGGGCCTGCAAGGGGCCATCCGTTCCTTCGAGGAAGGGGATGTGGAGCACGGCAGTGTCACAGCTCTGCAGACAGTTCATGGGGTTACTGCCATGACAGCTGCCGCCATGGGGAATCTGGCGAAGAGCACTAACGCTTTAACCAACAGACCGATACAAGTCATGGTCAAATTGGTCAGCAACCCAGTGTCCAAGAGAGCTCTGGTGGCCATTCCTGTGGTTGGGATCGGGATAGGGATTTATAACATCAAGGAGGACCTTAAGAGGAAGGACACTCTGGGATATATCGATGCAGCCCTAGATGCCACCATAGTTGCATTGGATGTTGTGGAGATGGGGGCTCCAGTGCTTGTCCCCGTTTTGGTCCCGGTCAATCTTGCCCTGTCTGTTGTACGGATGGCCTTTGATGATGTATACCTGGATGTCCAGACTGAGCTGGCCAAGCTTCCAAAGGATGCTGGATTTCTGCAGAAGCTAGGAGCTGCACTGAAGGGATTAGGAATGGGAATCCTGCACTTTGAAATGGATGTAGCAAGTTTTTTCTACACCATCCCCTATCGTGAGATCGAGGAAGGACACCACCTGGTGGAGCAGATCTCAGACTACCACAGGTACTACACCGTCCAGGTGGAGAAAGGTGGGAAGAGGGCCATAGACTTTGCAGGAGCAGAAGACTCCTGGAATGCCGGGAACATCACCTTCCACCTCTTTGACAATGGTAGCTCCCAGTTCTGCCTGGATAAGTTTATCTCCTCGAAGTCCAAGTTTGGAAAGCAATGTTGGGAACTGCAGACTGATGGGAAGATCCAGGACATTGTTCTAGGAATGGGGGAATCACACCACCTGAAATACAGCCACATCCAACGCAAGGTTCTGCTATTCATTCCAGCAGGCTCCACGACTGTGGTTTCAGGATATGAGGTGGAGTCCCACACAAGGTTTGGGACATATTACGGCAACCAGAAGGCTAATAATTTTTTCACCGTTCAGGAAGCCAAGGATGAGAAGATACCCAAGCTCATGTTGAGTTATTATTATCAGCTCTATGGGGAGAATGGAGATGATATCTTCTTCTTAGGACCCCAGAGGAGCTATGTAGAGGGGCGAGCGGGACGGGACACCTACATCATCCCTGCTAGCGGTGGAAACACCATCATCAACAACTCTGATCCAGAGAAGACTGAGGACATGTTAATGATCAAAGTCCCATATGAGAAAATATCAGTCAGCAGATCTGGGAAGCACATTATCCTGTCCTTCCTGGGAAGCCACCATGTAAAAGTCCTTGAATGGTTCTCTGGGGAGGAGTACCGCCACATGAAGATGGTATCGGGTGATGGTGTCCTGTTTGATGTCTCCATCCTTGCCATCGCCACCCCCCACCTTGTCGCCCGAGGAGTGAACAAGATGCAGGAGAAGAGTGGGCAAGTTGTGGACACCACTCATTCTCTCCTCGGAAACGTCACCAACATCGTCGGCTCAGCTTACAGTGACAAACTGATCGGAAACAAGCAAAATAACCTTATAgccgggggaggggggaaggaTTACATGAAAGGAGGAGAAGGGGAGGACACCTATGTGGTCCAGAAAAGAGAGGGCATGTCAGTGAAGATTGATAACTTTTCCACTGACAATAAAACTGACCTGTTGCTGGTGGAGGCAGAGTTACACAACTTGAGAGCTGCTGTTTTAAGGGATGACCTGGTTTTGTTATTCTCACCATGGCCAACCTCCTCTTTTGTCACACTGCTCAACTGGTTTCATTCTGAACAGCACAGGCACCTGCTCATTGTCACCCAGGATTTTGTAACACTCACTGTGTCAGAGAAAAAAACTTCCTGCTGGTATCCCAGAAACCAATTTCAGTCGGAATGCCTCCTCAGTCAGAACATGGATTACAGTAAATCCAATATCCCTCTGCTGGTCGATCTGGATAGTGACATGGCCCTGCAGGGAGTGACAGAAGTGCATGGCTCCAATTTTAATGACAGAATCAAAGGGAATGCAAAGGACAATGTGATCACCCCTGGAAGAGGTCAGGATTTCCTTAGTGGAGGAAGAGGGGCAGACAAGTATATCATCACCGTGAAACAGGGGCTCAAAACCATAGACAACTTTTCACCAAATGGGGTAACTGATGAGCTGTTCTTGAGAGAgggttatttaaatattgatgcTCAATGCAGAAACAAAGATATGGTGCTGTCTGTGAACAAGATAAACACGGTCATCCTGAAGCAGTGGTTTGAGAGCAGCTCCTTCCGACACCTACATGTCTATACGGCTGATGGGTTCAGGTTCACCTTGACGGATAATGTTAGTGACTGCGGCCAACACTTTTTGAAAATACCACTCTCTCTGGACTTCAGGCAGAGGAAGGGAGGAGCAATGATAAACATGTCCAATGGTGAGTTCTCTGCAGTGGTGGAGATGTACGGCTCACTAGGTTATGACAAGATGATTGGGAATGGGCAGGACAACATACTGGACCCAGGGCCAGGTGGGGCATGGATGCAGGGTGGAGAGGGGGCTGATACTTACATGCTGAAACCAGGCTATGATGGCAAGTTTGAGATCTTTAACTTTGCATTAGACCAACGGGAAGACACGGTGATGTTACCAGTGGATTTCCTGAGTGGGACTGATTCCATCTGGGCTGACTTTCTTGACTTGGTGGTAAACTGGAGGGTGCAGGGTAAAGACCTGAGCATCAGGCTTATAAAATATGGAGCTGGGCCCAGTTACCAGCACCTTTCCTTCCACACTTCCAATGGTGTCCTCTTCCGGTTCAGCTACCTTTCAGGATACACCAGCTCTCTCAGACCAGAACCCCAGATTGTGGCCTACAAAGTGGACCTACAGGGCAAACAGGAAGAGCAGCAGTGGGACCTCAGCAGTGACCCCCGTCTCTTCTCTGTGGAAACTGTACAgggctctctctcacactctaaTCACATCCACGGCAATAAGAGACAGAACGTGTTgctgggggggggcggggatGATGCGCTGGATGGGGCAGAAGGGGACGATACACTGGTGGGTGGCCAGGGGAAGGACATCCTGATGGGGGGCGAAGGGGACGACACTGTTTATGGCGAAGAGGGGGATGACTACTTAGTGGGTGATGGCGGACACGATGTCCTCGTCCCTGGACCTGGGAAAGACATGGTGGATGGGGGACCAGGAAGGGACACAGTGCTGTACCAGGGTGACCCAGAGACGGGCAGAGGAGTTTATGTCAATCTGCTAAgtggggagggcagggggggtGACGCAGAAGGAGATGTCCTGCGAGACGTGGAGAATGTGATCGGCTCCATCTACTCCGACTTGCTGGTCTCGGGCTATGAGGGGAGCCTGCTCAAGGGGAAGGCTGGCAACGATGTCCTGGTCTCTCTTGGAGGAGGGGACTACCTGATTGGGGGGGAAGGCAGTGACATCTACCTGCTGGACCCTGTCAGCGGCCTGGTGACCATTGACAACTGTGCCAAGGACAACGCCACAGACATCGTCTACCTCCGCTCCCTATCCTCCCAAGCTGTTAACTGCCAAATCCAGACACATGGCATCGTCCTGACTCTTCAGGGCCCCCATGCGCCCAACACTGAAGTCGTCCTGCCCACGTGGAACAACCACCCCAGCTGTCACCACCTGCAGCGCAGCGGCGGGAGATCAGGGCTGGggatctgtctgtctctgtttgtcctTCTGTCCATGCCTGCGAAGAGGAGAGGAGCTCTGTATACAGCAGGAGAGAAAATGGGCATCCCCTCTGCCCAGTCAGCCAGATTCTCCACAGAGGGGGAGAAGACACCTTACAATGACAGGCTTGGCAGAGAAGAGACGAGGGCACACCCAGTCATGATGTTTCCCCAGCTGGACAAACGCCAGTCAGTGGACATAACTGTAGAGCTGAAGACAGCGGGAGAGACGAGCTCAGACACTCTGAGATGTTGTACTGTGGGCAGTGATGGGACATTGACTTTGTCTGATGTCATTGCCCTCAATGGGGATGGGTTCCTGAGACTCAATGTGTCAGAGTGGCGCTGGGAGGCCCAGTCTTGGTCTCGCTCTGCCCAGGCTGAGAGCATTCAGAGCAGCTGGAACTCACAGGAGCGTCTGATCAGGAGAGACAAGGACTTCCTGCAGCAGGAGGGTGTGGAGTGGCTGAAGACACTGTGGACAGCCAGACAGAAGAGCTCCAGTCACACTGGTGAGAGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015607 True 7539 mRNA 0.50 8 13689090 13716822

Neighbor

gene id symbol gene type direction distance location
AMCG00015600 NA coding upstream 81835 13598286 ~ 13607255 (+)
AMCG00015597 NA coding upstream 172506 13501643 ~ 13516584 (+)
AMCG00015588 NA coding upstream 322960 13351516 ~ 13366130 (+)
AMCG00015590 NA coding upstream 351656 13329582 ~ 13337434 (+)
AMCG00015585 NA coding upstream 432937 13251013 ~ 13256153 (+)
AMCG00015609 NA coding downstream 85659 13802481 ~ 13821972 (+)
AMCG00015610 LOC100701608,LOC103356189,LOC108412483,LOC103470774,LOC103146641,LOC102233014 coding downstream 115773 13832595 ~ 13834746 (+)
AMCG00015616 NA coding downstream 268721 13985543 ~ 13993089 (+)
AMCG00015617 NA coding downstream 373145 14089967 ~ 14096267 (+)
AMCG00015618 NA coding downstream 387506 14104328 ~ 14112925 (+)
G98901 NA non-coding upstream 91375 13579724 ~ 13597715 (+)
G98889 NA non-coding upstream 172661 13493782 ~ 13516429 (+)
G98881 timm10,LOC107746912,LOC107674252,LOC107556822 non-coding upstream 229304 13458129 ~ 13459786 (+)
G98888 NA non-coding upstream 234964 13453887 ~ 13454126 (+)
G98876 NA non-coding upstream 297671 13387076 ~ 13391419 (+)
G98918 NA non-coding downstream 74220 13791042 ~ 13810939 (+)
G99053 NA non-coding downstream 200773 13917595 ~ 13918028 (+)
G99056 NA non-coding downstream 208426 13925248 ~ 13933503 (+)
G99068 NA non-coding downstream 334673 14051495 ~ 14065138 (+)
G99070 NA non-coding downstream 347107 14063929 ~ 14109320 (+)
AMCG00015602 NA other upstream 75798 13576196 ~ 13613292 (+)
G98884 NA other upstream 241811 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 251943 13433051 ~ 13437147 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other upstream 259790 13423880 ~ 13429300 (+)
G98759 NA other upstream 642277 12975639 ~ 13046813 (+)
AMCG00015608 NA other downstream 164603 13881425 ~ 13884671 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other downstream 380123 14096945 ~ 14100855 (+)
AMCG00015657 NA other downstream 1332101 15048923 ~ 15200978 (+)
G99475 NA other downstream 1597214 15314036 ~ 15314414 (+)
G99541 NA other downstream 2080128 15796950 ~ 15801634 (+)

Expression


Co-expression Network