AMCG00015613


Basic Information

Item Value
gene id AMCG00015613
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13826977 ~ 13829722 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015613
GGACTTTTTGGGTAGTACGGTGGCCTGGCCTTTCAATTCACAACATAAACACGGACCGCGTTCCCAGGAAGGACGCCATGACAGAAATATTCTCTTTGTACGGACAAAGCGATTCTCAAGGCTCCTCGGCGCTGGGCTTCGGGCCGGGGAAGCCTCCAGCCCCGCAGCCGCAGAACCAGGTGCCTATGGCGGTGCAGATCCCACCCCAGCTCGGGGATGAGGGGCCTACTCTGCGGAAACCCGCCGCAATGAACGAGCCTTTCTATTTACTGCGAGAACTGCCGGtgGGCACCGAGCTGACCGGGAACACTAACCTGATCACGCACTATAGCCTGGAGCACGCCTACAACAAGTTCTGCGGCAAGAAGGTCAAGGAGAAGCTCAGCAACTTCCTCCCAGAGCTGCCAGAGCAGTATAGACTGATGCACATCCAGCCTCCCAAGAAGAAGAGCAAACACAAGCACCGCCACCACCGCCCCCAGGACCCCTTGCCCCCTGAAACCCCCTCAGACTCGGAccacaagaagaagaagaaaaagagggaCGATGACCCCGACcgcaagaagaaaaagaaagacaagaagaagaaaaaggtgtgtttgtgtgaatga

Function

GO: NA

KEGG:

id description
K15137 MED19; mediator of RNA polymerase II transcription subunit 19

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015613 True 611 mRNA 0.56 5 13826977 13829722

Neighbor

gene id symbol gene type direction distance location
AMCG00015604 NA coding downstream 66247 13754068 ~ 13760730 (-)
AMCG00015605 NA coding downstream 84742 13740897 ~ 13742235 (-)
AMCG00015601 NA coding downstream 161200 13663657 ~ 13665777 (-)
AMCG00015603 NA coding downstream 202272 13606375 ~ 13624705 (-)
AMCG00015599 NA coding downstream 305963 13520664 ~ 13521014 (-)
AMCG00015611 clp1,LOC107750374,LOC107680590,LOC107594950 coding upstream 36129 13865851 ~ 13869990 (-)
AMCG00015614 NA coding upstream 227617 14057339 ~ 14076142 (-)
AMCG00015615 NA coding upstream 249772 14079494 ~ 14084022 (-)
AMCG00015623 NA coding upstream 267703 14097425 ~ 14101752 (-)
AMCG00015620 NA coding upstream 284272 14113994 ~ 14118650 (-)
G99002 NA non-coding downstream 10450 13579725 ~ 13816527 (-)
G98993 NA non-coding downstream 286020 13538527 ~ 13540957 (-)
G98992 NA non-coding downstream 286979 13539618 ~ 13539998 (-)
G98973 NA non-coding downstream 307457 13464858 ~ 13519520 (-)
G98950 NA non-coding downstream 410477 13396647 ~ 13416500 (-)
G99049 NA non-coding upstream 53401 13883123 ~ 13884670 (-)
G99051 NA non-coding upstream 71634 13901356 ~ 13902314 (-)
G99055 NA non-coding upstream 88353 13918075 ~ 13918324 (-)
G99058 NA non-coding upstream 95526 13925248 ~ 13931122 (-)
G99063 NA non-coding upstream 204536 14034258 ~ 14038303 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other downstream 358155 13458127 ~ 13468822 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 1396329 12399733 ~ 12430648 (-)
G98546 NA other downstream 2410315 11414367 ~ 11416662 (-)
G98543 NA other downstream 2440778 11353783 ~ 11386199 (-)
AMCG00015540 NA other downstream 2481487 11332663 ~ 11345490 (-)
AMCG00015612 zdhhc5a,zdhhc5 other upstream 4795 13834517 ~ 13864738 (-)
AMCG00015628 NA other upstream 465246 14294968 ~ 14336329 (-)
G99213 NA other upstream 617989 14447711 ~ 14456695 (-)
G99286 NA other upstream 651472 14481194 ~ 14482908 (-)
AMCG00015640 LOC103356187,LOC107382365,LOC107664566,LOC107551445,LOC107556825,LOC101483122,LOC102289392 other upstream 673042 14502764 ~ 14515279 (-)

Expression


Co-expression Network