AMCG00015625


Basic Information

Item Value
gene id AMCG00015625
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14221596 ~ 14234664 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015625
TGTCTGCTcacctcccccctctctctctgccagccCAGCTGTCAGTGTCAGGGTCCTGGGCAGCCCTGCCCCTCTCCCAGGCCCAGCAGGATCTCTTTGCCAACTCCAGCCTCCTGGCCCACTCACTGCCCCTGCTCCTGCTGCCCCGGCCTGGGGCGCCAGGCTTACCTGCAACAAACGCTCCGTCACACGCACAGACGTGCACACAGGCATGCAGGCAAACACACAGCATGGCTGCGCAAGAACAGTCCCGGAAAAAGTCCCGGCACATTGGGTGCTCAGGTCCAGCTGTATTACTCCACCTCGGGCTCCCCTGCTGTGTCCCCTACCTGCCAGGAGGACAAACTGCAGGAATCTCAGAATAGACTATATTACATTGGAGCGGTTAATctgggagaggcagggagagagggacagagaaaagATAATTTAGTAGGCATGCATACCCCCTccgcttcctcctcctcttccttctgtTCTGGCACTCAGAGAGATGCCCGTCACCGCACACAGGAAGGGGAGGAGCTCTGGCTGGATCCCAATGTGCTGATTGGCTACTGCAAGGGTCCAGTCAAGGCCGGACAGCCAATCGTGGTGTCCGTGCTACTCAGATCCAACTTCAGTGCTGATGTGGTGGTGATCAGGCTGAAAGTGAAGAAGGGCACGCTGACCATCTTGGCTGACTCCGCTGTGACCTCTGGCCCCTGGGCTGTTGGCGTGGAGAGGTCAGTGGGGGCGAAGCACGAGACAATGTCACTGATTTGTCACCGAATCAACAGCCTCTCCCAGACTGACAGGGTGCTGTGGGGGGTGGAGTATTCAGGACGCAATAACCCACTGCCTCCACTAGGGGGCATTGTGTCCACATTCACCTTCACTCACACTGACATAGTGGGCATTGCACCCATCCCTGAGACCACCTCCCTGATCAACACTGCTGTGCTCACCGGCCAGCCCGTGTCTCTTCCTGTCACTGTGCTGGCAGTGGAGCATGATGGGAAGGTTTCAGATGTCACCAGTGCTGCAATCTGCCGCTCCACTAACAAGAACATCATTAAGGTGTCGAGTGACTGCTCCGCCCTGTTTGTGGATGGCAGCGAATCCGGGCCGGGGGGTGTGTGCGTGGAGGTGGAGTTCTCTCTGGGGGCGCTCTCTGGCTCCCTCTGCCTGACAGTGTGGGCGCCGCAGCTgcccctgtctCGTTCCTCAGTGCAGGTCCTGGCCCAGTTCACAGCCCTTGCCCCTCTGCGTGGCCGCAGTCGGCTGATCTACATGCTGGGCTCTCCTGACTGGTCGGTGGACGTGACGGCGCTGGTCCGCGATTGGCTGAGAGTGGAGGACCCCCGCGTGGTGTCCACTCAATGGGACAGTGTGCTGGGGGCAGTTGAGGTCACTGTTTCACCTGACCCTGTGACCCTGGATGACCTCTGGGTGCAGCTGGTGACTGGACTGAGCCTGTCAATCACCGCCAGTCCCTCCCACCCCGCGGTTGTCACGGCAACACCCCGCCCACTTCCCAAGGCAGTTGCCCGGGGTGACGGGGGCGGGCCTCTGCTCAGAGCAGAGTTGGTGTCCGTCCCCTGCCGCAGCTCCCAGCCAATGGGGAGTGAGGGGGACGTTGCCCTGGCGGGGGGCTCTGGCTGGGTGCGGGTGAAGTTGCAGCCTGCCTCCCGGGCAGTGGGAAGCGAGGAGGCGGAGTCTGAACTGCTGGAGATCTCCGAGTTTCTCTTGGAGTCAGATTCTGAGAACAGTTTCCAAGACAATGACAGCCACTCGGGGGGCAGGGAAAGGGAGGAGATCTTCATGACCATGGACTGTTCGTTGTTCCTCCCCCTGACTCTGATCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015625 True 1848 mRNA 0.60 10 14221596 14234664

Neighbor

gene id symbol gene type direction distance location
AMCG00015619 NA coding upstream 74626 14141122 ~ 14146970 (+)
AMCG00015618 NA coding upstream 108671 14104328 ~ 14112925 (+)
AMCG00015617 NA coding upstream 125329 14089967 ~ 14096267 (+)
AMCG00015616 NA coding upstream 228507 13985543 ~ 13993089 (+)
AMCG00015610 LOC100701608,LOC103356189,LOC108412483,LOC103470774,LOC103146641,LOC102233014 coding upstream 386850 13832595 ~ 13834746 (+)
AMCG00015629 ndufs8,ndufs8a,LOC107679876,LOC107746464,LOC107674223 coding downstream 218853 14453517 ~ 14456893 (+)
AMCG00015630 NA coding downstream 227996 14462660 ~ 14467684 (+)
AMCG00015636 NA coding downstream 267090 14501754 ~ 14502659 (+)
AMCG00015639 NA coding downstream 287733 14522397 ~ 14538432 (+)
AMCG00015637 ssrp1,LOC108262778 coding downstream 323085 14557749 ~ 14573035 (+)
G99093 NA non-coding upstream 68971 14126621 ~ 14152625 (+)
G99070 NA non-coding upstream 112276 14063929 ~ 14109320 (+)
G99068 NA non-coding upstream 156458 14051495 ~ 14065138 (+)
G99056 NA non-coding upstream 288093 13925248 ~ 13933503 (+)
G99053 NA non-coding upstream 303568 13917595 ~ 13918028 (+)
G99120 NA non-coding downstream 36717 14271381 ~ 14425466 (+)
G99125 NA non-coding downstream 81736 14316400 ~ 14324233 (+)
G99136 ankrd13d,LOC108424219 non-coding downstream 151469 14386133 ~ 14387285 (+)
G99138 NA non-coding downstream 153756 14388420 ~ 14390665 (+)
G99149 NA non-coding downstream 175098 14409762 ~ 14448040 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other upstream 120741 14096945 ~ 14100855 (+)
AMCG00015608 NA other upstream 336925 13881425 ~ 13884671 (+)
AMCG00015602 NA other upstream 608304 13576196 ~ 13613292 (+)
G98884 NA other upstream 774317 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 784449 13433051 ~ 13437147 (+)
AMCG00015657 NA other downstream 814259 15048923 ~ 15200978 (+)
G99475 NA other downstream 1079372 15314036 ~ 15314414 (+)
G99541 NA other downstream 1562286 15796950 ~ 15801634 (+)
G99624 NA other downstream 1896380 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 2198779 16433443 ~ 16457842 (+)

Expression


Co-expression Network