AMCG00015630


Basic Information

Item Value
gene id AMCG00015630
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14462660 ~ 14467684 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015630
ATGATCAACAACAAGGATCTGTACCAGactCTGGACTCCTCCTGTGCTCTGCAGTGCTGGGTTGATGTGATAGAGAGGGACATTGACAGACAGTTCCCCTTCCATGAGATGTTCTTGTCCAGAGATGGTCACGGGTACCACTGCCTCTCCCACTaccactcactctctcactgtcACTCTCTTACTTGCTCTCTGTCACTGCCACTCTTTCAGTGTCACTCTCACTTTGTAAAAGTACACCTGCGGAAACACGGGGTGGAGCCGCTCATGTACCTGACCGACTGGCTGATGTGTATGTACAGCCGGACACTGCCCTTCAACACACTGCTGCGCATCTGGGACCTTTTCTTCTGtgaggGGGTGAAGGTGCTGTTCAGGGTGGCAGTGGTTCTGGTGCGGATGGCTCTGGGCTCATCTGAGAAAACTAAGGAATGTGACGGACAGATGGAGACGTTGGAGCAACTGCGCACGATAAACGTCAAGAACCTGCACGAGGACGCCTTCATTGAGGAGGTGTGTGCGGTGTCTGTCTCTGAGAGGGAGGTGCAGCGGGAGACGGAGAAGGAGCTGGAGGCCTGGCGGAGTGAGAAACCGCACTCGCCCTTCGACCCCAGGGGGCGTTGCCACGGCTACCGGGCCGCTTGGGAGCAGGGactgcaggaggaggaggagaggaaaaggAGGGAGACCGAGAGTGGGAACCTTACCTTGCCCCACTCCCCCGCCCGCcaaccctcctcctcctcttctgggGGGTTAAAGAAACCGAGAGGGGGGAGCCGGAGTCAGCTGGACTTCCTGAGAGCAGGAGTTCGgaaagagaggagggagggaagaaaagACGAGTGCAGAGAGGGAAGGGAGGGGGAtagggagaaggagggagagggaggcggagagaggagagagttcAGTACAGAGGAGTGTggcatgaagagagagaaggagagggagggagagaaggatggAGAAAAGGAGAAATCAGAGTGGGTGGAGGGGAGAGAGTCCAAGACACAGGAGTGTGCAAGAAAGGGAGAGGGGCCAGGAGAAGGAGTGAAAGAAAggggggagggacagagagaatccAGGACAGAAGAATGCAGAGCAAGGGAAGAGCCTGGGAAGGAGGAGAAGGATGGTGGAGCGacagaagagagaggagagaatggccagaaggagggagagggggagatggaggggGACAGAGGTGAAAGGgtagagggagaggcagagaaaggAAGAGACAGTGAGTTTAAGAGTGGAGGAGAGGCgggagaaagtgagagagaaggagagggactgagagagggagaggtggacCTGCCTGATGGTGACGAggtggagagagaaagggaaggagTAGGCATGCCCAgtggtggagagggagagggacagactcagagagggggagagggagagagaccgGAAGAGGTGGCACTGCCCAGTaatggagaggcagagagagagggggagggagaaagcTGCCTCCGTGTGGAGGCAGTGTGTGGTGAAGCCAGGGAGGCTGGGAGGCCAGGAGAGAGACACTCATGGAGTAGCTTTGGGGAAAGGGGGAAGGGTagcgggagagagggagggagagggaggagtgcGTCCATGTCCATGCTGGCTGGGAGAACGTCGTTAGCTGggggaggagatggagggagagagagcgggagagggaAGGACGGAATGGCGGAGGTGGGCGAGAGGAGCACGAGAGAAGGAACACAGGAGAAAGGAGAGTGGGAGGATAGAAtaagggaggagggagaggaggagaagggagggctggtggagggagagaggactGCAGAACCGATGCACCCCCCAGCAACACAGACTTCTAACACGCTCGTCTCCATGGCGATCATGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015630 True 1878 mRNA 0.58 6 14462660 14467684

Neighbor

gene id symbol gene type direction distance location
AMCG00015629 ndufs8,ndufs8a,LOC107679876,LOC107746464,LOC107674223 coding upstream 5767 14453517 ~ 14456893 (+)
AMCG00015625 NA coding upstream 227996 14221596 ~ 14234664 (+)
AMCG00015619 NA coding upstream 315690 14141122 ~ 14146970 (+)
AMCG00015618 NA coding upstream 349735 14104328 ~ 14112925 (+)
AMCG00015617 NA coding upstream 366393 14089967 ~ 14096267 (+)
AMCG00015636 NA coding downstream 34070 14501754 ~ 14502659 (+)
AMCG00015639 NA coding downstream 54713 14522397 ~ 14538432 (+)
AMCG00015637 ssrp1,LOC108262778 coding downstream 90065 14557749 ~ 14573035 (+)
AMCG00015638 p2rx3b,LOC107556786,LOC107674197,LOC107664541,LOC107746906 coding downstream 113265 14580949 ~ 14582350 (+)
AMCG00015643 NA coding downstream 142195 14609879 ~ 14616756 (+)
G99149 NA non-coding upstream 14620 14409762 ~ 14448040 (+)
G99137 ran1,ran,LOC107588340 non-coding upstream 18518 14441491 ~ 14444142 (+)
G99120 NA non-coding upstream 37194 14271381 ~ 14425466 (+)
G99229 NA non-coding downstream 25330 14493014 ~ 14495627 (+)
G99232 NA non-coding downstream 79313 14546997 ~ 14550448 (+)
G99259 NA non-coding downstream 150567 14618251 ~ 14618610 (+)
G99325 NA non-coding downstream 308414 14776098 ~ 14776461 (+)
G99342 NA non-coding downstream 412072 14879756 ~ 14880075 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other upstream 361805 14096945 ~ 14100855 (+)
AMCG00015608 NA other upstream 577989 13881425 ~ 13884671 (+)
AMCG00015602 NA other upstream 849368 13576196 ~ 13613292 (+)
G98884 NA other upstream 1015381 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 1025513 13433051 ~ 13437147 (+)
AMCG00015657 NA other downstream 581239 15048923 ~ 15200978 (+)
G99475 NA other downstream 846352 15314036 ~ 15314414 (+)
G99541 NA other downstream 1329266 15796950 ~ 15801634 (+)
G99624 NA other downstream 1663360 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 1965759 16433443 ~ 16457842 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000053_05675892_05686424 NA coding CI01000053 null 5674979 ~ 5686424 (-)