AMCG00015638 (p2rx3b,LOC107556786,LOC107674197,LOC107664541,LOC107746906)


Basic Information

Item Value
gene id AMCG00015638
gene name p2rx3b,LOC107556786,LOC107674197,LOC107664541,LOC107746906
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14580949 ~ 14582350 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015638
gggTAACTTGCTGCCCAACATTACCAATAAGTACATGCATAAATATGCTAAGTACTTTAAGACAAACAATGGCACAGAATACCGCACTCTGCTCAAAGCCTATGCCATCCGCTTCGATGTCATGGTCTATGGGGATGCTGGGAAGTTTGACATGATCCCAACTCTGATCAACATGGTAGCAGCTTTTACCTCAGTTGGAGTGGGCACGGTCCTTTGTGACATCATCCTTCTCAACTTCCTGAAGGGGGCAGACCAGTACAAGGCCAAGAAATTCGAAGAGGTGCAGGAATATCCCATTGGCCGCCTCTGTGTGTCTGCCCCTGTTACATCTCGGCCAATAGGAGTC

Function

symbol description
p2rx3b Enables extracellularly ATP-gated cation channel activity. Acts upstream of or within cation transport. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Predicted to be integral component of nuclear inner membrane. Is expressed in Rohon-Beard neurons; cranial ganglion; and trigeminal ganglion. Orthologous to human P2RX3 (purinergic receptor P2X 3).

NR:

description
PREDICTED: P2X purinoceptor 3-like

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0035590 purinergic nucleotide receptor signaling pathway biological_process
GO:0006812 cation transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004931 extracellularly ATP-gated cation channel activity molecular_function
GO:0001614 purinergic nucleotide receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015638 True 346 mRNA 0.48 4 14580949 14582350

Neighbor

gene id symbol gene type direction distance location
AMCG00015637 ssrp1,LOC108262778 coding upstream 7914 14557749 ~ 14573035 (+)
AMCG00015639 NA coding upstream 42517 14522397 ~ 14538432 (+)
AMCG00015636 NA coding upstream 78290 14501754 ~ 14502659 (+)
AMCG00015630 NA coding upstream 113265 14462660 ~ 14467684 (+)
AMCG00015629 ndufs8,ndufs8a,LOC107679876,LOC107746464,LOC107674223 coding upstream 124056 14453517 ~ 14456893 (+)
AMCG00015643 NA coding downstream 27529 14609879 ~ 14616756 (+)
AMCG00015646 NA coding downstream 137724 14720074 ~ 14807398 (+)
AMCG00015648 NA coding downstream 248492 14830842 ~ 14890943 (+)
AMCG00015653 NA coding downstream 384253 14966603 ~ 14968812 (+)
AMCG00015650 NA coding downstream 410530 14992880 ~ 15009509 (+)
G99232 NA non-coding upstream 30501 14546997 ~ 14550448 (+)
G99229 NA non-coding upstream 85322 14493014 ~ 14495627 (+)
G99149 NA non-coding upstream 132909 14409762 ~ 14448040 (+)
G99137 ran1,ran,LOC107588340 non-coding upstream 136807 14441491 ~ 14444142 (+)
G99138 NA non-coding upstream 190284 14388420 ~ 14390665 (+)
G99259 NA non-coding downstream 35901 14618251 ~ 14618610 (+)
G99325 NA non-coding downstream 193748 14776098 ~ 14776461 (+)
G99342 NA non-coding downstream 297406 14879756 ~ 14880075 (+)
G99350 NA non-coding downstream 323257 14905607 ~ 14907243 (+)
G99348 NA non-coding downstream 470047 15052397 ~ 15161865 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other upstream 480094 14096945 ~ 14100855 (+)
AMCG00015608 NA other upstream 696278 13881425 ~ 13884671 (+)
AMCG00015602 NA other upstream 967657 13576196 ~ 13613292 (+)
G98884 NA other upstream 1133670 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 1143802 13433051 ~ 13437147 (+)
AMCG00015657 NA other downstream 466573 15048923 ~ 15200978 (+)
G99475 NA other downstream 731686 15314036 ~ 15314414 (+)
G99541 NA other downstream 1214600 15796950 ~ 15801634 (+)
G99624 NA other downstream 1548694 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 1851093 16433443 ~ 16457842 (+)

Expression


Co-expression Network