AMCG00015643


Basic Information

Item Value
gene id AMCG00015643
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14609879 ~ 14616756 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015643
GACTCCCTGCTCTGCCTCTCCCCATCCTGGCTCTCTCGcccctcctcctcgtcctctcCCAATGACTCACACNNNNNNNNNNACCGGGCAGTGATCTTTGACCTGGGTGGCCGCACCCACCTGGTGACCTTCATCCCTCCCCGTCGGGTCACATACTTCCTACCTTGCGCTCCCTGGGTGGAAGTGGGCCCACAACAACAGGAAGTGATTCGCAACCTGGGCTGTCCAATGGGAGGCTCTCCTGAGTTGTATCGTTTCTGGGGTGACACTCTGAACTGCAGGAAGATTCTGGGTAGAGAGGGGCTGCTGCCCACCCCCCCCACGCTGGCTGTGGTGAtccaggaggagagagagagcaagggggagggggagagagggttGTGGGTGCTGGGAGTGGGGGATGTGGCAGAGAAGGGAGAtgaggagagagtgagggaggagCTGATGCATTTTCTAAACATGCCGGCTATCAGAGCAACTGGGAAAGTGGTGCTCAAGCCCAGTGGAGGCCGGTGGGTGGGCATGTCTGGGTGCAGGCGGCCAATACGCTTCTTAGATGGGCGGGACCCCGAGGCTGTGTGGGTGGAGCTGCGTTCTCTACTGGCCCAGCTGCAAAGACAGGAGGCAGCTCTTATCGAGGCCTACTGTCCCAGCATAAATCCTGGTCCTAGATTTCCTCACCCGGGCAGCCAGGCACACCCAGTATCAGAGTTGTCTATGAGActATTGTGTAGGGTGGGCCTCAGTGAGCTTCCCCTCTCTCACTGGGACAGTCTGCCCcagtctctcctctcctccctgcagGACTGGGGCCTGGGTGACCGCTCCATTGTTCTCTCCCTCCGTCGGCTGCTAACTCACTCTGCCCTTGACTGGGACCCCACTGTGACCCCTGTGATTCTGGGCTTGCACCCCTGGAGCTGCTTGCAGAGCTGCTGTCTTGGAGGGGGGGTAGGGTGGAGAAGGCAAGGagggatggaggaggaggaggagggctgTGTGGGCTCTCTCCTCCACTCCCCGCTCTCTCGCTCGCAGAGGCATCTGCTGCAGGAGAAGAGGGTGCTGGTGGTGGGGGCAGGGGGAGATAGCAAGGCATTTGTCTGGGAGGTGGCTAAGGAGTTCGGTGTGGAGAGCTGCTGTCTTGGGGGAGGggcatggaggaggaggaggaggcgaggagggaggaaggaagaggaggaggaggaggaggaggagggggaggatgAAGAAGAGGGCTGTGTGGGCTCTCTCCTCCACAGCCCGCTCTCTCGTTCCCAGAGGCACCTGCTGCAGGGGAGGAGTGTGTTGGTGGTGGGAGCCGGGCGAGCCAGCAAGGCATTCGTTTGGGAGGCGGCCAAGGAGTTTGGTGTGGAgatctTCCTGGTGGAATCTGACCCCGCTCATTTTGCCGCCCATCTGGTCTCCCACTTCTTGCCCCTGGACCTGTCCGACCACCGCCAGGACACCGAGCACTGTGCTGCCGTGGTGACCTGGCTCAGGGGGCACAACCTCCGACCCCAGGGCGTCCTGTGCTTCTGGGATGACTGCATTGTGCTGGCCGCCCTTCTGTGCCAGGCGCTGGGTCTCCCTGGCAACCCCCCCTTCGCCGTCCTCACCGCCAAGGAGAAGAGCCGCACCCACCTCCACCTGCAGGGCCACCACCTCCCTcgctcctctcctcctccttcctctgcTCCTTCTGCCCTCTATGCTCCTCctactctctctcctctctccatctctccctcgcCCTCTCTCCCTGTTGCTACCCCCTCCCTCCCCGCAAGTGTCCCTCAGTCCCAGCCTGCCATCCCCCGAGGCCTGCAGCACCCCCTGCTGCCCCTCCTCACACCCCCTCCCTGTGTGTACGCCGTGCCCTGCGCCCACATTGAGACCCCTGATGACATCATCAGGGCCGTCCGCCCTGTCAATTGCTCTGGCAGCTACCACAGGCATCCCAGTAACTGCCCCGGTCAACTCAGTAACTGCCCCAGTCAGTCCAATGACTGTCCCTGTCAGTATAATAATTACCCCAGTCACTCCAATCAGACTAATAACTATATCAGTAATTGTCCTAGTCTGGCCAGTTACCCCAGTACCTACTCCTGTCAGACCAGTAACTACATTAACTTCAGTGGGACCAGTAACAGACTCTCCAGTCAGACCAGTATCAGCATTAACCCCAGTAACAGCAGTTGCCATAGTAACCCTATTCAATCCAGTTATCCCGGTGACTGCATCACCAGTGAGAGCATTATTACCAGTCATGCCAGTAACTACAATAACCCCAGTGTCCGTCATCCCACTCCCAATCCCTCCAGTCTGCTCAGTGCCACTGCCCCCACCCTTACCCCTGACTCCACTCTCTCCTATCCAAATAATCTCTCTCCCACTTTCACTCACACTGACGACCATCCCACTATCCCTCCCCCATCTCCCAGCACTCCCATTCCCTCTCCCCATCCTCCTTCCTCTGCCACACGCACTCtcaatccccccaccccccagatCCGCTTCCCTGCGGTGCTTAAGCTGGAGTTTGGGGCGGGGGCGGTGGGCACGCGGCGGGTGGGGTCCTTGGAGGAGGCGCTGGCTCACCTGGCGCAGGTGAGGGGCGACTTGCGGGGCGAGGCCGACTTCCCGGGCATCGGCCTGGGCTGGGGGGGCGGCCTGACCCTCATGGGCTACCTGGGGGGCACCGAGCATGACGTGGACCTGGTCCTGAGCGGGGGCCGGCTGGAGGGGGCCTTCGTGTCGGACAACGGCCCCACTCGAGTCCCAGGCTTTACCGAAACGGCGGCCCAGATGCCCACAGGCCTCTCCTGGGAGCAGGAGGCTCGATTAGTGGCGGCGGCCCATTCCTGCTGCCTGGGCTGCGGACTGCGGGATGGGGTCTTCAACGTGGAGCTCAAGCTGACCCCCACCGGGCCCAAGCTGATCGAGATCAACGCGCGGATGGGGGGGTTCTACCTGCGCGACTGGATACGGGAGGTGTTTGGGGAGGACCTGCTGCTCTGCGCCTTCCTGTGTGCCCTGGGGATACGGCCCCGCCTGGCCCGGCCCCGCCCCCCCGTCCTGTGCCACCTCACGGGGGTCATGGGCCTGCTCTCCCAGCACGGCCGGCACATCATGAGCAGAGAGGGTATGGGGCGGCTCAGGGAGCTGCACCAAAGGGGTGTGGTCAGGCTGTGTGAGCTGGGGCTGGAACAGCAGAAAGGGGAAGAGCTCCAGCAGCAGTTGAGGCAGGGAGGAGTAGAATTCCAGCAGGAAGGAGTGGGGCTGCAGCAGGAAGGGGCGGGACCACGGGGCCAGTATGAGGAGCCGTTCTGCAGTGTGGGGGTCAGGGCGGAAGGAGGGGTGGAGTCCAGGCTGGGACTGCTCACTGTTAGCAGGGTGCTGGGGCTGGACACCCCTGAGTACCCTGTTGAACACTTCCTGTCACACTTccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015643 True 3453 mRNA 0.62 9 14609879 14616756

Neighbor

gene id symbol gene type direction distance location
AMCG00015638 p2rx3b,LOC107556786,LOC107674197,LOC107664541,LOC107746906 coding upstream 27529 14580949 ~ 14582350 (+)
AMCG00015637 ssrp1,LOC108262778 coding upstream 36844 14557749 ~ 14573035 (+)
AMCG00015639 NA coding upstream 71447 14522397 ~ 14538432 (+)
AMCG00015636 NA coding upstream 107220 14501754 ~ 14502659 (+)
AMCG00015630 NA coding upstream 142195 14462660 ~ 14467684 (+)
AMCG00015646 NA coding downstream 103318 14720074 ~ 14807398 (+)
AMCG00015648 NA coding downstream 214086 14830842 ~ 14890943 (+)
AMCG00015653 NA coding downstream 349847 14966603 ~ 14968812 (+)
AMCG00015650 NA coding downstream 376124 14992880 ~ 15009509 (+)
AMCG00015654 NA coding downstream 521290 15138046 ~ 15156253 (+)
G99232 NA non-coding upstream 59431 14546997 ~ 14550448 (+)
G99229 NA non-coding upstream 114252 14493014 ~ 14495627 (+)
G99149 NA non-coding upstream 161839 14409762 ~ 14448040 (+)
G99137 ran1,ran,LOC107588340 non-coding upstream 165737 14441491 ~ 14444142 (+)
G99138 NA non-coding upstream 219214 14388420 ~ 14390665 (+)
G99259 NA non-coding downstream 1495 14618251 ~ 14618610 (+)
G99325 NA non-coding downstream 159342 14776098 ~ 14776461 (+)
G99342 NA non-coding downstream 263000 14879756 ~ 14880075 (+)
G99350 NA non-coding downstream 288851 14905607 ~ 14907243 (+)
G99348 NA non-coding downstream 435641 15052397 ~ 15161865 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other upstream 509024 14096945 ~ 14100855 (+)
AMCG00015608 NA other upstream 725208 13881425 ~ 13884671 (+)
AMCG00015602 NA other upstream 996587 13576196 ~ 13613292 (+)
G98884 NA other upstream 1162600 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 1172732 13433051 ~ 13437147 (+)
AMCG00015657 NA other downstream 432167 15048923 ~ 15200978 (+)
G99475 NA other downstream 697280 15314036 ~ 15314414 (+)
G99541 NA other downstream 1180194 15796950 ~ 15801634 (+)
G99624 NA other downstream 1514288 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 1816687 16433443 ~ 16457842 (+)

Expression


Co-expression Network