AMCG00015646


Basic Information

Item Value
gene id AMCG00015646
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14720074 ~ 14807398 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015646
ATGGAAGAGGCCAAAGGCAAATTCTCAGTTGTTGGCAAGAGATGGTGCAAGTCAGAGAGGGAGGATGTGGCAGAGAGAGTGGGCATCACCATTGACACAGACCATCTCAACTATTACCATCTCTGGCAGCTCAGTGAGGAGATGCCCATGCTGCCTCTATGCCATGTCCTTTCAACACTCAAAGAGGAGAAGCAGTGTAAAATGgatCGTGTGGTGAGCGCTTATTACAATCATGCCTCCTCAGGTTTAACAGAGCTGCTTGATACAGGTATTCAAGCGCTCCATGGCATGAATCAGCTCCTACGTCTGCACAACGGCGTAGATGCAATACTCGTCATTTTCCTGCTCAGAGACACAAGGGTGCAGGAGGAGAAAGGCAAGACAGTGAGTCACAGTCCAGTAGCTCAGCCTCACATCCACAACACATCAGCACTCAGAGAGACCTGCACCCTGCAGTGCTCTGTGGCCAATGGGAGAGAGGTGACCCTGTCCTGGTACAGGGAGGGGGGGAACATCTCCCTGAACCACACCAGCTCCCCTGACCCCCACAGCACTCTGACTGTCTCTGTGGAGATAGCAGGACTGAGCAATGACACCTACAGCTGTGAGGCCAGAAACTCTGTCAGCACTCAGACCAGACGGAGAAACCAGCAGAAAGAAGGACAGGGTCACCTCTCTCCCATTGGCCACAGAGCACAGGAGAGGGCAGCTCCCAGCACTCACCTGGGTCTTATTGGACACCTGAGGTTTGGACACGTGGTCTGTAGAGAGAGAGGCAACAGCAGTGAGGTCTGCAGCCCTGCTCAGatTGGAACTGGCAGCATTTCCAAAGGAAAATCCCCATGGTTGACCAAGTCTACAATCTCCTTAACATGGTATGAAAGAGACATACCACTACAGCAGCAAATCTATGAGAGAGCTCAGAGCCCTCAGAGAGGAGCTGTGTGTGCATCGTCAATGTCCCGGGTGGTGTTAGTGGGACTCCCACATGTAACCCGGGCCCTGCAAACCTTACTGAGACCTGGAGGAAAGGACCGGAACCTACAGAACCCAGGACAGTTCACAGCAGTCTACTACCACATGGAACATTTGACTGCATCATCAAGCAATGCAGATATTGCTGGGAGAGCAATGAAgGTCAAGAGGATGATGGAAGATGGAACCTTTGTAGGTTTCTGTAACTTCCTGGCTGACTTGTTTGACGCCATCAGCAAATTCAGCCTTCTCCTTCAAAGGAATTATATCATCTTGCCTCAGGCTGTCAGGGGGATTGAAAATCTCATTGTGACTGTTGAGGCCATGGCAGTCAGATGCAAGCCAGGTGGTAGGCTAGCAGAGCTACAGGCAGACCTTCAGCCCCAGAAACTAGGGCAGGAGGATGATGGTGAGACTCACCCTGTCTACAAATATCAGCCATCCTACGAATGTCTAACTCAGGGGGTCACCATCAAAAGAGAAGCTGCTGGACTAGCAGAGGATGGGAATTCCACAGCAAGGATACCAAAGCTGCAGCAAGCAGTGAAAGCAACAATTGACTGTACTGTGCTGCACTTGAAACAAATATTCAGCAATGAAGAGtccacagcaacagcaaccgCAAAGGCAGTGAGGTCATTCAAGATCTTCAGTCATGATTCCTGGCCAGAGCAGAGAGACCAGCTGATAGACTATGGTGCAGAGGAGCTGGACTTCCTGCTGGACCACCGTGTTAACAAGGAACCCCCGCTCTGCCACTCGGGCTGGGAATGTGACCGACTCTCCCACAGTGCCCTTCAGCTGCCTCTGTGCAGACTGGGCAGCAGCTGGACCTGGAGCTGTGAGGGACGGAGAGAAAGCGTCTGTGAGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015646 True 1848 mRNA 0.52 14 14720074 14807398

Neighbor

gene id symbol gene type direction distance location
AMCG00015643 NA coding upstream 103318 14609879 ~ 14616756 (+)
AMCG00015638 p2rx3b,LOC107556786,LOC107674197,LOC107664541,LOC107746906 coding upstream 137724 14580949 ~ 14582350 (+)
AMCG00015637 ssrp1,LOC108262778 coding upstream 147039 14557749 ~ 14573035 (+)
AMCG00015639 NA coding upstream 181642 14522397 ~ 14538432 (+)
AMCG00015636 NA coding upstream 217415 14501754 ~ 14502659 (+)
AMCG00015648 NA coding downstream 23444 14830842 ~ 14890943 (+)
AMCG00015653 NA coding downstream 159205 14966603 ~ 14968812 (+)
AMCG00015650 NA coding downstream 185482 14992880 ~ 15009509 (+)
AMCG00015654 NA coding downstream 330648 15138046 ~ 15156253 (+)
AMCG00015656 NA coding downstream 398192 15205590 ~ 15214257 (+)
G99259 NA non-coding upstream 101464 14618251 ~ 14618610 (+)
G99232 NA non-coding upstream 169626 14546997 ~ 14550448 (+)
G99229 NA non-coding upstream 224447 14493014 ~ 14495627 (+)
G99149 NA non-coding upstream 272034 14409762 ~ 14448040 (+)
G99137 ran1,ran,LOC107588340 non-coding upstream 275932 14441491 ~ 14444142 (+)
G99342 NA non-coding downstream 72358 14879756 ~ 14880075 (+)
G99350 NA non-coding downstream 98209 14905607 ~ 14907243 (+)
G99348 NA non-coding downstream 244999 15052397 ~ 15161865 (+)
G99375 NA non-coding downstream 384271 15191669 ~ 15252714 (+)
G99384 NA non-coding downstream 440851 15248249 ~ 15271657 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other upstream 619219 14096945 ~ 14100855 (+)
AMCG00015608 NA other upstream 835403 13881425 ~ 13884671 (+)
AMCG00015602 NA other upstream 1106782 13576196 ~ 13613292 (+)
G98884 NA other upstream 1272795 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 1282927 13433051 ~ 13437147 (+)
AMCG00015657 NA other downstream 241525 15048923 ~ 15200978 (+)
G99475 NA other downstream 506638 15314036 ~ 15314414 (+)
G99541 NA other downstream 989552 15796950 ~ 15801634 (+)
G99624 NA other downstream 1323646 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 1626045 16433443 ~ 16457842 (+)

Expression


Co-expression Network