AMCG00015650


Basic Information

Item Value
gene id AMCG00015650
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14992880 ~ 15009509 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015650
CActgcttctgtctctctctctgcagacaaTGTGTCCAAACCTCAGGTGTCCAGTGAGACCCAGGTCAGTGCTGGGAGCTGCCCTTTCCTGTGCTCTGTGGCCAATGGGAGAGAGGTGACCCTGTCCTGgtacagagagggggaggagaagcCCCTGAACCACAGCAGCTCCCCTGATCTCAACACCAACCTGACTCTCCCTCTGGAGACAGAAGGACTCTCTCACTCCTACAGCTGTGTGGCCACCAACCCCGTCAGCACTGAGAGAGTCACAGTCAACACTGAGGAGCACTGCCTTGGCCCAGTGTCCAGTCCTCAGGTGTCCAGTGTCACCCAGGCCAGTGCTGGGAACTGTAccctgctgtgctctgtgtccaATGGGAGAAATGTGACCCTGTCCTggtacagagacacagacaacaAGACCCTGAAACACACCAGCTCTCCTGATCCCAACACCCTGACTGTCCCTCTGGACATCCCTGACCTCTCTGTGTCCTACAGCTGTGTGGCCACCAACCGCCTCAGCACTGAGAGAGTCCCAGTCCACCCTGAGGAGCACTGCTTCAGTGATGACATTGTGTATGCCTCCATTAGCCACAGCCACCCCCACAGCCAGGCTTGCAGGTCTGCTCGCAGCAAGAACATGgaaaatgacgAGTACTGCATATACGCCGGGGTGCAGACATAGGAGCTGAACCTGtaggtgggggggcagagggaTGAGGAGATCCCCCCCTACCCCTGCTCCTCTTCCAGTATTAATGGGGGCACAGCAGCATTTGTATCCTGAGATCAGCGGTGTGGAGACATCTCCAGTGTGAGGAGAGTGAGAGATGAGTGGACTGGTGAACAGGTATAACACAGCTTTCTCTCACAGAATGATTGGTAAATGTGCCCTGCACACAGCGACCTTTCCATAATCTTATCTGGACATTTTTCTATGACTACAGCTACTACAGCCCTACAGCTACTACATTTAGGGACAGAAACCAAATGAGCAAAGTTTGCACTGAAGCAAAAACCTCTGTTGTAGTGTTTGGTAAAAGCAACATGACATCTTAGCACCTGTTCTACTAAACTTTTAAaggggtaaaaaaaatatttaacagaaaaAGGTTAAAAGCAAAGCCAGAAAGAAactttaaagtgtatttttattgtctcaaaatgtaaatgttgtaaatatGTGTATGCTCTTTCAACTGTAAATATGTGTGCACAGTCCTCAAAATGGGTTGAGTCCCAGTTTAAACAGTGTCTTAGAGGTGAGAGAAATCCTGGGTGTGTGACTGGGCACTGAGAGCAGTCTATTTGTCCTGCTGCTTGAATGCCAATGGTTTTGAACATGCTTTAATGCCTTGCCTACCTAGGCTTTCCAATCCTACtgtattatttgtcttttaGTTCTTCGCTTTTGTAAATCTATAATGCTATTAGTTAAAATAATGCAGCCAATGTGGTGCTGAAtgggttgtgtgtgttggagaACAGTGGGAGGCATTTGGATTAACCTGTGTAATGACAGGTGAATATGCCCTTTCACACAAGCATCGAATAAGCTCTGTTAGTgctttaaaagtttttatttttaaaaatacagcaatgtaatataacaaaataagccagaccattagagagagagagagagacagacagtgagagacagagaggaagagagaccGAGGTCAGCTCTCTGGTCAGAATGTTGGTTTAGATGTGTTgcaagaaagagaaggagaagaagaggaTGAGTGTTTCTGTCACTTCTTATTTACTCTCCAGTGGTTTCCCAACTGTTAGAGTTTCCATTATTTATCTGATCAGCTGCTTCTGCTTTACGGAGCTGATAAAACACACCAAAGCCTGCCTACAAACACAGGGTCTGATCATCAGCTCGCTTAGCTCTGTGTGGATTCAACCCCTCACCCTCTGGAGCACTGAACTCCCCCCAGCTCTTGGTACAGGGCTGCTGCAAATGTGAACCTGAAAGCATTACGCTCAAAGCAAAGGATTTCAGGGAAATTTCTTGATTTAGCCTGAACAATTACAGAGCAAGATTAAGATGACTCAGGACTGATCAACTTGTCAGCTCTGCTCTGTCAGAAGTCCATTCCCCTTCGGTTGGCTGTTATTGTGAGAGCATTGCTGGATGATGCTGATGTGTCATGGATTGATCACTGGGGGAGAGAGCAGAAGCACAGGCCAAACACGCCAACACAGTCAATGTAAGAGACTCCCCACCCCTCGGTACTGGAGGCCCTGTTGTGGGACAGGTGTGCCAGGCGGGGTTATACTGTGAGCAGTTTATGGATCAAAAGTTTATAGACTAGAAGCACATCCCAAATCTTATGAGGTGCCAGGGAAATTGAGAGATCACCACATAATATACTGGGAATCAGCAGTGACTGTGTTTcagcatcttttttgttttctatttagatacatatttatttgttatttgaaaatgttaaaagtgctctccatgaaaaataaataaaatactgtctCACAAGACTTTGAGCtggctgctgtgtgtttctggtggggttttattttacctttgtGATGTTACAGCTGAATTGCTCTTATAGTTCTCTGcagcatgtattttattttattaaagtttaatgatattagcaaaataaaacaatggcaaaaaactaaaataaaaacagcaatctgtgtgtgtctttacgTACAACACTGTCTGAGTTGTGAAGTGCAATTAAGTATTTCAATGCTGATTATAGACTATGCTGCTGACACGGGTTTATTATTCCATTTCTCAGAagataaatcaaataaagaagAAAGGGGCTCGTTCTGTACACTAATATTGTCAATATCAAAGACTATTTCTGCTATTCAAGGCAGCTGAGAATTGAGGAAGACAGGAACTTCTGCTTTTCCTCACTTCAGTGCCGCAACAGTTGCTCAAGTCTGCACACACAGTTGTGGGAAGTGGCTGTTGTGCAACCTCGACAGGATGCCATTTCACACACTTGGTTTTTCCACCaagtcagggaaaaaaaaaagtttaatgttttttaacaataattgaaaatatgttcAGTTGCTCGATACTGCATCGATACTCGATGTCCTCAAAAACTTAACATTGAACAAAATGtttgatttcaaaatgaaataactgtatttttacactttgttttacacttatgttgtaatttgccctggataagggtgtctgccaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015650 True 3219 mRNA 0.44 4 14992880 15009509

Neighbor

gene id symbol gene type direction distance location
AMCG00015653 NA coding upstream 24068 14966603 ~ 14968812 (+)
AMCG00015648 NA coding upstream 101937 14830842 ~ 14890943 (+)
AMCG00015646 NA coding upstream 185482 14720074 ~ 14807398 (+)
AMCG00015643 NA coding upstream 376124 14609879 ~ 14616756 (+)
AMCG00015638 p2rx3b,LOC107556786,LOC107674197,LOC107664541,LOC107746906 coding upstream 410530 14580949 ~ 14582350 (+)
AMCG00015654 NA coding downstream 128537 15138046 ~ 15156253 (+)
AMCG00015656 NA coding downstream 196081 15205590 ~ 15214257 (+)
AMCG00015661 NA coding downstream 250532 15260041 ~ 15269845 (+)
AMCG00015663 NA coding downstream 304044 15313553 ~ 15348690 (+)
AMCG00015665 NA coding downstream 701683 15711192 ~ 15728592 (+)
G99350 NA non-coding upstream 85637 14905607 ~ 14907243 (+)
G99342 NA non-coding upstream 112805 14879756 ~ 14880075 (+)
G99325 NA non-coding upstream 216419 14776098 ~ 14776461 (+)
G99259 NA non-coding upstream 374270 14618251 ~ 14618610 (+)
G99232 NA non-coding upstream 442432 14546997 ~ 14550448 (+)
G99348 NA non-coding downstream 42888 15052397 ~ 15161865 (+)
G99375 NA non-coding downstream 182160 15191669 ~ 15252714 (+)
G99384 NA non-coding downstream 238740 15248249 ~ 15271657 (+)
G99566 NA non-coding downstream 892942 15902451 ~ 15959723 (+)
G99644 NA non-coding downstream 1199934 16209443 ~ 16209643 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other upstream 892025 14096945 ~ 14100855 (+)
AMCG00015608 NA other upstream 1108209 13881425 ~ 13884671 (+)
AMCG00015602 NA other upstream 1379588 13576196 ~ 13613292 (+)
G98884 NA other upstream 1545601 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 1555733 13433051 ~ 13437147 (+)
AMCG00015657 NA other downstream 39414 15048923 ~ 15200978 (+)
G99475 NA other downstream 304527 15314036 ~ 15314414 (+)
G99541 NA other downstream 787441 15796950 ~ 15801634 (+)
G99624 NA other downstream 1121535 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 1423934 16433443 ~ 16457842 (+)

Expression


Co-expression Network