AMCG00015665


Basic Information

Item Value
gene id AMCG00015665
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 15711192 ~ 15728592 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015665
GCGATGGCTCCAGAGCCTCCCAATGTCCGAACCCTGCATGTCTCACCATTTGCTTTGCTCTGTGTGGATGTTACGAGGCCATTAAGTTACTGTTTCTCTTATGCAGGGCTCTGTCCATCACCTGCCCAGTCTGAGGGGCAGAAACTGAACGGCATTATGGGAGACGAGGTCGCTTTTAATGCCCCAGTGTTATCAGATGGGATTTTGAATTACAAAGAAGTTGGCTCTATTGCCTTTGTGACCGGTGGGCAGAGCAGCCCTGTCAATGTGGACAGGTTCAAAGGGAGAGTGCACTGGGCCAGAGAGACTGGGCACTTCCACATCACACAGCTCAACACAGAGGACTCTGGGCAATATAGAGTGCAGAACACAGGAGGAAGCGTCTCAGACACAACAGTATCCAGTAAAACCCAGTTCAGTCTGCTGTGCCCTTTCCTGTGCTCTGTGGCCAATGGGAGAGAGGTGACCCTGTCCTGgtacagagagggggaggagaagcCCCTGAAACACACCAGCTCCCCTGATCTCAGCACCCCCCTGACTCTCCCTCTGGAGACAGAAGGACTCTCTCACTCCTACAGCTCGCTGGCTCTGAAGATTGCAGTGACAGCTGTGTTCTCAGTGCTGACAGTGCTGGCTGTCCTCACTTACCTTGGAaggtgtgtcagtcaggcagtAAGCCACAGAGTCAGGCAGATCTGTATGCAGTCTGCAATCCCATCAGTCAGTGCCAGTGGCCTACCCGCTTGGAGCTGCATGCTGCTCTGCCTGGCTGCCTCTGGGGGGCGCTGGGGAGCACTGTCAGGTGCCCAGTGTCGTCAGGACGACCTGAAACATGAGGACACAGGAGAGGTGCGGGTCATTGTAATTAACTATGAGTCatcagtgtttgtgtctgtgctgctACCTCTGAACTGTGTTTCCTGTGCTATGAAAGCAAAAAAGGCACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015665 True 951 mRNA 0.54 5 15711192 15728592

Neighbor

gene id symbol gene type direction distance location
AMCG00015663 NA coding upstream 362502 15313553 ~ 15348690 (+)
AMCG00015661 NA coding upstream 441347 15260041 ~ 15269845 (+)
AMCG00015656 NA coding upstream 496935 15205590 ~ 15214257 (+)
AMCG00015654 NA coding upstream 554939 15138046 ~ 15156253 (+)
AMCG00015650 NA coding upstream 701683 14992880 ~ 15009509 (+)
AMCG00015668 NA coding downstream 100079 15828671 ~ 15902686 (+)
AMCG00015673 NA coding downstream 231225 15959817 ~ 15961407 (+)
AMCG00015671 patl1 coding downstream 233767 15962359 ~ 15986250 (+)
AMCG00015670 NA coding downstream 280444 16009036 ~ 16047634 (+)
AMCG00015669 NA coding downstream 325749 16054341 ~ 16057795 (+)
G99384 NA non-coding upstream 439535 15248249 ~ 15271657 (+)
G99375 NA non-coding upstream 458478 15191669 ~ 15252714 (+)
G99348 NA non-coding upstream 549327 15052397 ~ 15161865 (+)
G99350 NA non-coding upstream 803949 14905607 ~ 14907243 (+)
G99342 NA non-coding upstream 831117 14879756 ~ 14880075 (+)
G99566 NA non-coding downstream 173859 15902451 ~ 15959723 (+)
G99644 NA non-coding downstream 480851 16209443 ~ 16209643 (+)
G99662 NA non-coding downstream 567233 16295825 ~ 16296030 (+)
G99697 NA non-coding downstream 730268 16458860 ~ 16504418 (+)
G99742 NA non-coding downstream 807493 16536085 ~ 16536332 (+)
G99475 NA other upstream 396778 15314036 ~ 15314414 (+)
AMCG00015657 NA other upstream 510214 15048923 ~ 15200978 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other upstream 1610337 14096945 ~ 14100855 (+)
AMCG00015608 NA other upstream 1826521 13881425 ~ 13884671 (+)
AMCG00015602 NA other upstream 2097900 13576196 ~ 13613292 (+)
G99541 NA other downstream 68358 15796950 ~ 15801634 (+)
G99624 NA other downstream 402452 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 704851 16433443 ~ 16457842 (+)
AMCG00015687 NA other downstream 766100 16494692 ~ 16498531 (+)
AMCG00015703 rps3a,LOC106592945 other downstream 1369867 17098459 ~ 17131775 (+)

Expression


Co-expression Network