AMCG00015669


Basic Information

Item Value
gene id AMCG00015669
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16054341 ~ 16057795 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015669
gttactttccacccctgcaCAGCACCACACTACAgagacagcacaacacagcaccaatgtgaccctctctctctccccttacCACTCCATCCCTTTCAGCCACTGTTGCCATGGACACCTCCTCATCCTCCCAAGTCCTCCTGCCCCCCCTCTCCAGGGTGGTAGTTTCTGGGGGCACACATGGTGATGAGATGGGGGGGGTGTATCTGGTGCAGGGTGGGGCGCCTTGTCTGAAGAGGACCACGTTCACAGCACAGACGATTCTCTCGAACCCGCGTGCCACAGAGGCACGAAGACGCTACACAGAAGCTGACCTCAACCGCTGCTTCACCAGTGCCTCCCTCAGcacccctctctctgcagacagCCCATATGAATTGCGTCGGGCTCAGGAGCTGAACCGGGCCCTGGGTCCGAAGGGGGGCCCAGGGGCGGTGGATGTTATCTGTGAtctgcacaacacaacaaccaACATGGGGCTGTGCTTGATCGGCTACTCGACCAGGGACTGGATCTGCCTGCACCTGTACCGTTACCTACAGGAACAGATGCCGTCAGCGTCAGTGCGGTACCTGGTGTttgaggagggagaggaagggtcCTACTCTCTGGAGTCTATGGCTAAGCATGGCTTTGCAATGGAGATGGGTCCTCAGCCACAGGGAGTTCTGAGAGCTGATCTGTTCTTCCAGATGAAGCAGGCAGTAACCCACACACTGGACTACATAGAGCTCTTCAACACAGGCACAGTGTTCAGGGGCGGGGGGGTCGAGGTGTACAGAAAAGTGTGCACTTTGGATTACCCCCGTGACCCCCACACCCACCAAATCACTGCAGCAGTACATCCCCAGCTACAGgatcGTGACTTCTGCCTCCTTTCCCCGGGAGATCCCCTCTTCCTGACTCTGGCTGGGGGCGAGACATTGCCTTATGAGGGGGAGACACCGCTGTACCCAGTGTTTGTGAACGAGGGAGCATACTACGAGAAAAACATTGCAGTCACACTGGCACAGAAAGAGACTGTGCTGCTGCCCCCTATGTCTGTACAGAGGGAGTGAGAAAGGGAAATGGTGGGAAACAGAGAGGAGGATAAATGGAGACTATAACTGTatggggcagcagtgtggagttgtggttactgctgttgtactcttgagcaagggactggacctagattgctccagtaaatgcccagctgtataaatgggtaaaacataatgtgatataatgtaacaattgtaagtcaccctggctaagggtgtctgctaagaaatttagaaaaattaataatataattaaacaagtCTAATTTATTAGTTTCTCTCTGCTGTCTTTCACAGACTCTCTAACACATACTCACAATATATAGtagaagtaaatacattaatttatataatacagtattgcagaattttatatgtatttattaatatgtgaATACAGATATTGGCACTGTACTCCACTGTCattgtacaaataataacagtaaaaaaataaaagtagtgGTTTATAGttgaaagacagacacagagcatGTGTGGTTTAGTGTGAAGATGaacacagactctctctcacacacacaatctcttgcacgctatctctctctctctgtcacacacacacacacacacacacaacaatcaCTTGCACAGTCATGCTCTCTCTAACACACAGAGAGCATGCAAGAGattatctcacacacacacacgcacacactcatgCTGATGCTATCTCTCTATGTCTGTCAAATACACACACGCTCACAGTTCCAGGTTAATACCAGTATAAAACAGGTTGTACAATGAGCGGATTGGAGGACAGAGGAGCACTAAAAAATAAGAGATCAGACATCAGAAAGCCAGCAGCGCCCCCTATAAAGCTGCGCTGTGCAAAGTGGCAGCAGCCCCAGGGAACCCTTGCTgtggtttttacaaaagaacaTGCTGTTTAAAGAGGAGAGATGTGGTTCTGCAAGGTCTCCTGTTGGACAGACAGGGCTATTGAAACGACAGGGCAGCGGATCAATGCGCAACTCGACACTAGAAACACTCAATGAGCATCTCCTGCGCAAGCTCTGATGACATCATAGGCCCCAGGCCAAGCAGGGAAGGAATTGGGCACAGTTTCCTGCCCTGTCTGAACTGAGCCAAGAGACCCCACACCTCCCCTACCAGCAAACAGACCATCTGgccataataataacaatcatacaaatgataaaacacaacaaataccTAAAACAAATGTTCCAAAGAAACCAtatttaacacaataataataataaaaactaaaaataaaacaggcatAAATTAGCCAAAGCACACAGGTTTAAAAGCGCTCTTGTTCACAACTTGATCGGAAATGAcatcagaacaaaaacaataacaacaatctataataataataataatattaacaatgacAGTGCTGCTGATATTGAAATTATAGATTGATTAATCAAGTCACTACgtcccctctctccttctctctcctcctctctttactgccttctctctccccctcatcCCTTCCCtgccccccacctctctctctcctgctctcacctttctctccttccctctctcctgcatccaccctcctctcc

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K18458 ACY3; N-acyl-aromatic-L-amino acid amidohydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015669 True 2605 mRNA 0.48 6 16054341 16057795

Neighbor

gene id symbol gene type direction distance location
AMCG00015670 NA coding upstream 6707 16009036 ~ 16047634 (+)
AMCG00015671 patl1 coding upstream 68091 15962359 ~ 15986250 (+)
AMCG00015673 NA coding upstream 92934 15959817 ~ 15961407 (+)
AMCG00015668 NA coding upstream 151655 15828671 ~ 15902686 (+)
AMCG00015665 NA coding upstream 325749 15711192 ~ 15728592 (+)
AMCG00015675 NA coding downstream 2549 16060344 ~ 16066517 (+)
AMCG00015674 NA coding downstream 52772 16110567 ~ 16112538 (+)
AMCG00015679 NA coding downstream 362601 16420396 ~ 16433377 (+)
AMCG00015678 NA coding downstream 396189 16453984 ~ 16461379 (+)
AMCG00015684 NA coding downstream 423553 16481348 ~ 16483888 (+)
G99566 NA non-coding upstream 94618 15902451 ~ 15959723 (+)
G99384 NA non-coding upstream 782684 15248249 ~ 15271657 (+)
G99375 NA non-coding upstream 801627 15191669 ~ 15252714 (+)
G99348 NA non-coding upstream 892476 15052397 ~ 15161865 (+)
G99350 NA non-coding upstream 1147098 14905607 ~ 14907243 (+)
G99644 NA non-coding downstream 151648 16209443 ~ 16209643 (+)
G99662 NA non-coding downstream 238030 16295825 ~ 16296030 (+)
G99697 NA non-coding downstream 401065 16458860 ~ 16504418 (+)
G99742 NA non-coding downstream 478290 16536085 ~ 16536332 (+)
G99745 NA non-coding downstream 480442 16538237 ~ 16539381 (+)
G99541 NA other upstream 252707 15796950 ~ 15801634 (+)
G99475 NA other upstream 739927 15314036 ~ 15314414 (+)
AMCG00015657 NA other upstream 853363 15048923 ~ 15200978 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other upstream 1953486 14096945 ~ 14100855 (+)
AMCG00015608 NA other upstream 2169670 13881425 ~ 13884671 (+)
G99624 NA other downstream 73249 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 375648 16433443 ~ 16457842 (+)
AMCG00015687 NA other downstream 436897 16494692 ~ 16498531 (+)
AMCG00015703 rps3a,LOC106592945 other downstream 1040664 17098459 ~ 17131775 (+)
G100007 NA other downstream 2262261 18320056 ~ 18325904 (+)

Expression


Co-expression Network