AMCG00015700 (fbxw7)


Basic Information

Item Value
gene id AMCG00015700
gene name fbxw7
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16835026 ~ 16870359 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015700
TCGGTGCCGGCGGTGCTGCCGCTCTTGCGCTCGCTGGGGGACGCGTCCGGGCATGTCCAGAGCGCAGCCCGGGCCGGAGCACCTGAGAGCGGGCTGTCGCACCGTACCTACCGGGCGCACGTTTGGGGGCTTCAGCATCTGCCAGTGAAGAAGCACCACAGGATTACAACGATGGGGTTCTACGGCACTTTAAAGATGATTTTTTATAAAGTGAGTAAGGCGGcgggTTCATTCATCGCTAACCACAGCCCTGTTGTTCTTCTCTCCTTTGTATTACAGATGAAGAGAAAGTTGGACCATGGCCCTGAGGTCCGATCTTTCCCTTCAGGAAAAAAACCCTGCAAAGGTTCAGAGTATCCAAGtCCCACAGGGCTTGTTCCATACCCAGCTACCCCCACCACATTTGGTGACTTGAGGGCAGCCAATGGACAAGGACACCAGCGTCGACGGATCACATCAATCCAACCCCCAACCGGACTGCAAGAATGGCTCAGGACATTTCAGAGCTGGAGTGGACCAGAAAAGCTCCTAGCATTAGACGAGCTCATAGACAGCTGCGAACCGACGCAAGTCAAACACATGATGCAAGTGATCGAGCCGCAGTTCCAACGAGATTTCATCTCCCTTTTGCCCAAAGAGCTGGCCCTCTATGTCCTCTCATTCCTGGAACCCAAGGACCTACTGCAGGCTGCACAGACATGTCGCTACTGGCGAATCTTGGCTGAGGACAACCTGCTGTGGAAGGATAAATGCAGAGAGGAAGGAATTGAAGAGCCCCTTCACATCAAGAGGAGAAAAGTGATCAAACCAGGCTTCACACACAGTCCCTGGAAAAGCGCTTATATCAGGCAGCACAGAATAGACACAAACTGGAGAAGAGGAGAACTTAAGTCACCAAAgGTGCTTAAAGGTCACGATGATCATGTGATCACATGCCTTCAGTTCTGTGGCAATCGAATTGTCAGCGGTTCAGATGACAACACGCTTAAAGTCTGGTCAGCTGTCACTGGAAAGTGTCTAAGAACATTAGTTGGGCATACGGGTGGTGTCTGGTCATCCCAAATGAGGGACAACATTATCATCAGTGGTTCAACAGACCGGACTCTCAAAGTATGGAATGCAGAGACGGGGGAATGTATCCACACACTGTATGGGCATACCTCTACTGTCCGTTGTATGCACCTGCATGAAAAAAGGGTGGTGAGTGGCTCTCGTGATGCCACGCTGAGAGTTTGGGACATTGAGACAGGCCAGTGTTTGCATGTTCTCATGGGCCATGTGGCGGCAGTGCGCTGCGTACAGTATGATGGAAGGAGAGTGGTGAGCGGAGCCTACGACTTCATGGTGAAAGTATGGGACCCTGAGACGGAGACCTGCCTGCACACACTTCAGGGACACACCAACAGGGTCTATTCATTACAGTTTGATGGAATCCATGTAGTCAGTGGTTCTCTAGACACATCAATTCGTGTCTGGGATGTGGAGACGGGGAACTGCATTCATACATTAACGGGGCATCAGTCATTAACAAGTGGGATGGAGCTCAAAGACAACATACTGGTCTCTGGCAACGCAGACTCCACTGTTAAAATCTGGGACATCAAAACAGGACAGTGTTTGCAGACGTTGCAAGGTCCCCATAAACACCAGAGTGCCGTGACTTGCCTACAGTTTAACAAGAACTTTGTAATAACCAGCTCAGACGATGGGACTGTGAAACTGTGGGACCTGAAAACAGGTGAATTCATCCGCAACCTGGTGACGCTGGAGAGTGGGGGAAGCGGTGGGGTTGTATGGCGAATCCGAGCCTCCAACACCAAGCTGGTGTGTGCGGTTGGCAGTCGTAATGGCACAGAGGAGACCAAGCTGCTGGTGCTGGACTTTGATGTGGATATGAAATGAAGGAGGTTGGGGGCAAGATGAGGTTTCAATACGTCTCAGTAAGTTATGTCAAAACACTTCACTCCCCACCACTACTACCATCTTCACCACTCCAGTTTAAACTCCAGACACCCCCAACCCCTTGATCTGATGGGAGAAGCAGAGGCTGGTTTGTGGCAACATGACGCACCATTGTAGACTGCTGGgaaggggagaggaagaggaaggatgATAACTGACAAAAAGGCCAACATGCCGTCTTAACGCATAATCGACCTCCCTTTTCATCTCGGGGCAGCTCCGCACAGAGAGACTTGTTCACTCAAGCCTGATGCAACCGTtaagatgtataaatatatatattttttttgttttttgtttttttgtttttttccacacaaacagacaactgATTTACTGAATCACCGCTGTATACATAAGACTAAAGGAAAGAACGTTTTCATGTAAGAAATGTTAAATAGTgtaaagaggaaaataaagtaaataaaaattaaataaagagctTCTTATCGGGGGAAAACATACATAGAATAAAAGCCAAGAACTGATAGACTTTCAAACCAGGAGGCATCTGCCTCAGTTCTATActatttttgttgctgttgtttttctgtcttgtttcCTGGTTTGAATACTACATAAAAGAAACCGAACTGTGAATTCTAGTTTTTGTACATTTgatcaattcaattaaacttcTGCCTAATGTTGCCAACAACAATCAGTCACAGTATTAACCTCCGTTTCTCTTTACTCTTTCTCTCTactggtttaattttttttttttttttttaaacaatctggGTTTATTGCTCTGGAAAGACAAGCTGTCCTGaggttttttggttttgttttgttttctttcttgttttcaaagAGTCTGGCTAGTTTAGTTCCTCAACGCTGGTGCTAAGTGGTGGGAGGGGTCTCTGTGAGCTAATGGGAATCATGTCCCATCCCTGTACTGTATTCCCAGTGGCCAAACTTTATTTATGCTgctaaaagaaaagaaaggtagAACTTTTATTGCTGCGACGTTTTAGTCCCAGACTAAATTCCAAATTTACTCTAGTTtggactttttaaaataaacattaaaataatctaatttttTGCCACTGAAACTTGAGCCAAATGTGCCTCTAAGAGGCTGAGAGTAGGAAAGTGTTGGAAAGACAAAGACGGGTTTGCCTGcaaggaagaaacaaaaatgggtgtgcagatttgtgtgtgtgtgtgtgtgtg

Function

symbol description
fbxw7 Acts upstream of or within angiogenesis; negative regulation of myelination; and regulation of signal transduction. Is expressed in glioblast (sensu Vertebrata); neural tube; neuroblast (sensu Vertebrata); spinal cord; and trunk. Orthologous to human FBXW7 (F-box and WD repeat domain containing 7).

NR:

description
PREDICTED: F-box/WD repeat-containing protein 7 isoform X2

GO: NA

KEGG:

id description
K10260 FBXW7, SEL10; F-box and WD-40 domain protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015700 True 3147 mRNA 0.46 11 16835026 16870359

Neighbor

gene id symbol gene type direction distance location
AMCG00015698 NA coding upstream 46517 16728102 ~ 16788509 (+)
AMCG00015699 NA coding upstream 124224 16679746 ~ 16710802 (+)
AMCG00015686 NA coding upstream 259840 16571651 ~ 16575186 (+)
AMCG00015692 NA coding upstream 265775 16568448 ~ 16569251 (+)
AMCG00015688 NA coding upstream 312145 16516896 ~ 16522881 (+)
AMCG00015701 gatb,LOC106602370,LOC106602377 coding downstream 102006 16972365 ~ 16993281 (+)
AMCG00015706 NA coding downstream 282916 17153275 ~ 17153478 (+)
AMCG00015705 NA coding downstream 316479 17186838 ~ 17235784 (+)
AMCG00015708 NA coding downstream 411320 17281679 ~ 17300446 (+)
AMCG00015707 lrba,LOC106602365 coding downstream 447934 17318293 ~ 17330594 (+)
G99780 NA non-coding upstream 182924 16650149 ~ 16652102 (+)
G99774 NA non-coding upstream 229047 16605756 ~ 16605979 (+)
G99772 NA non-coding upstream 232079 16600201 ~ 16602947 (+)
G99771 NA non-coding upstream 235607 16598479 ~ 16599419 (+)
G99745 NA non-coding upstream 295645 16538237 ~ 16539381 (+)
G99803 NA non-coding downstream 261 16870620 ~ 16871120 (+)
G99833 NA non-coding downstream 135053 17005412 ~ 17006477 (+)
G99836 NA non-coding downstream 142303 17012662 ~ 17013041 (+)
G99839 NA non-coding downstream 162070 17032429 ~ 17032729 (+)
G99840 NA non-coding downstream 196802 17067161 ~ 17067590 (+)
AMCG00015687 NA other upstream 336495 16494692 ~ 16498531 (+)
AMCG00015682 NA other upstream 377184 16433443 ~ 16457842 (+)
G99624 NA other upstream 703639 16131044 ~ 16131387 (+)
G99541 NA other upstream 1033392 15796950 ~ 15801634 (+)
G99475 NA other upstream 1520612 15314036 ~ 15314414 (+)
AMCG00015703 rps3a,LOC106592945 other downstream 228100 17098459 ~ 17131775 (+)
G100007 NA other downstream 1449697 18320056 ~ 18325904 (+)
AMCG00015725 smad1 other downstream 1874528 18744887 ~ 18771966 (+)
G100338 herc3 other downstream 3397048 20267407 ~ 20268285 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 5808478 22678837 ~ 22683895 (+)

Expression


Co-expression Network