AMCG00015715 (prmt9)


Basic Information

Item Value
gene id AMCG00015715
gene name prmt9
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 18057882 ~ 18068675 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015715
CAATGCCCAATCCTAGCACTCGTCCCAAGCCTGTGAGACGCAGTTGCCGGCTGTCAAGGGGAAATGGAGCTAGGAATGAGCTGGTGTCTAGGTCTCTGGAGAGCGCACAGCAGTGCCTAGTGAATCAAGATTATGGAACTGCTTTTGTCCATTATCTCTTAGTGATTAACCTGGCCCCTGCACTGAAGGATTTTGCCAGGGAATCCTTCAGATTTACTCTTTTCAAATGGGCAGAGGAGCTGGATTCCCTAGGCCGCATCCAGGATTTGTTCAACAGTTACGAGCAGGCACTGGAGCTATACCCAGATGATGAAGTCATTGTGAACAGTATGGGAGAGCACCTTTTCAGAATGGGGTTTCGAGATGAAGCTGCTGGCCACTTCCACAAAGCTTTAAAGCTGAAGCCCGACTTTGCTGATGCAAAAGAGAATTTCTACAGAGTTGCCAACTGGCTAGTGGAACGCTGGCATTTCCTCATGCTTAATGACAGCAGGAGGAACACTAAGTATCAGCAAGCCATCCAGAAAGCTGTGAAATCTGGGTACAATGTTGTGCTCGACATTGGCACTGGCACAGGTATTCTTGGTATGTGTGCTAAGACTGCAGGGGCTGCTGAAGTTTATGCCTGTGAGCTTTCTAAGACCATGTATGAGCTTGCCTGTGAAGTAGTTTCTGCCAATGGAATGAATGGAGAGATTAAGATTCTGCACATGAAATCTCTGGAAATGGAAATCCCTAAAGACATCCCTAATAGgGTTTCACTTGTGGTAACTGAAACTGTGGATGCAGGATTGTTTGGTGAAGGTATTATAGAAAGCTTGATTCATGCTTGGAACCATTTACTCCTGCCCCCTCAGATTTCCGCCAAGCCGTCAAGCAACCCCGCGAAAACAGGACGAGTCATCCCTGCCGGTGCCACCGTGTTTGGCATGGCAGTGCAGTGTCCAGAGATACGGCGCCATCACAGggtgtgtgtgACTGCAGTTGGGGGCCTGTGTTTATCAGGAGTTGGGGAACTCCATAGCCCTGTGAGCTACTCCAAGGATGCCGATGACTCTACAGAGCCCTACACCACTGAGCGGCTGAGCCAGATCCAGGGAGGATATACTCCTCTGACTGAACCCTTCCAGGCTCTCGCTATTGATTTCAACAACCCACAGGAGCTGGAGGGCCTGTGCTCTCGGAAGGCCTCTCAGATCAGCTTGCCGATTACCCAGGAAGGTGTCTTGGATGCCATTGCTGTCTGGTTTGTGCTCCATCTCGATGAGGAAAATAGCCTTTCCACAGGGCCCCAGGAAGAGACCTGTTGGGAGCAGGCCATCTATCCTGTCCAGAATCTCTTCAATTGCACGGTTAAGCCTGGTGATAGCCTATTGCTGGAAGTTTCATGTCAGGATGCATACTTGAGGATCTGCAGTTTGGACTTGGTTACAACTGAGAAAATGGCTGTCGTAGAAGAGGCATCTCAAAGATTGGAGACCAACTCTACCTCCAGTGCTGAAGCTGAGCTCTGCACTGCTTTAGCCTGCCTTCAAACAAGCCAGGGAAGTGGTCAGCGGAAGTTTATGTTGGAATGCTCTGAAATAGCCCTGCTGAACAATTCCCAATATCATGACAGTTTTAAAAGAGCCTTTTGCAAACTTCTGTCAGCTTTAAAAACAGGCAATAAATCTGAGGCTGTTGAGGATCCTGTGTGCATCACTGACTGTGGGAAAAAATGTACTCGAGAACATGCACACTCTGCCCCCGACCCCTTGTACGTACTAGATGTCTCTGAGGGCTTCTCAGTCTTGTCGCTGATCGCAGCCAAGCTCGGCTCGGTAAAGGCCTTTAGCTCTGTGGAAAAGGAACAGCACCAAGCGGTGTTAAAACGTTTGGCAGAGGTTAACGGGGTTTGTGAGCAGGCTCTGGAGTTTTGGCTCAATCATGTGGAGGATGACTCCTCTGTTCTGCAGAGGCCATCGACAGAAAAGCTTTGGAGTGCCATTGTCCTGGACTGCGTGGAGACCTGTGGGCTTGTGCGGCAGGAGCTGATGGAGAAAGCTAATCTTGCCAGgTGCCTTCTGGAGGACAGGGGGCGAATATTTCCTGAGCGTATTGTGATGTACGGGATGCTGGTTGAATCTGACACATTGCTTTTGGAGAGTGCTGTCCAGGGCACAGAGCCAACTCTTGGATTCAATATTGCACCATTTATCAACCAGTTTACAGTGCCTGTCCATGTGTTTCTGGATCTCTCTACCCTTCCTTGCAAACACCTGAGCCAGCCAGTCGAACTCTTCACACTAGACCTCATGAACTCCAGGGCAAATTACACAAGCCGAGAGGTTAAGGTGGAGGCCTGCGCTTCAGGCAGAGTGACAGCAGTGCCGTTCTGGTACCAGGTCCACCTGGATGATGAGATCAGCCTGAGCACCTTCAGTAAGGACTCCCACTGGAAACAGGCTGCTGTGGTTCTCCATCAGCCCATAGAGGTTTGTACAGGGGACCAGCTTGTACTCCGCATTCAGCAGCACAAGAGCAGCATCTCCATCACTGCGCGCCGAGAGGACCCACAAGCAGCCACCGCCTCTGCCAAC

Function

symbol description
prmt9 Predicted to enable protein-arginine omega-N monomethyltransferase activity. Predicted to act upstream of or within peptidyl-arginine methylation. Orthologous to human PRMT9 (protein arginine methyltransferase 9).

NR:

description
PREDICTED: putative protein arginine N-methyltransferase 9

GO: NA

KEGG:

id description
K19737 PRMT9; type II protein arginine methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015715 True 2579 mRNA 0.50 12 18057882 18068675

Neighbor

gene id symbol gene type direction distance location
AMCG00015714 nr3c2,mra,mrb coding upstream 104813 17945489 ~ 17953069 (+)
AMCG00015716 nr3c2,LOC107550687,LOC107742541,LOC107670737 coding upstream 138400 17890492 ~ 17919482 (+)
AMCG00015709 lrba,LOC107598261 coding upstream 610221 17416375 ~ 17447661 (+)
AMCG00015710 lrba coding upstream 672557 17351282 ~ 17385325 (+)
AMCG00015707 lrba,LOC106602365 coding upstream 727288 17318293 ~ 17330594 (+)
AMCG00015726 slc10a7,LOC106591891 coding downstream 383702 18452377 ~ 18458170 (+)
AMCG00015728 NA coding downstream 609143 18677818 ~ 18682808 (+)
AMCG00015727 NA coding downstream 621063 18689738 ~ 18716514 (+)
AMCG00015731 NA coding downstream 737414 18806089 ~ 18828015 (+)
AMCG00015734 anapc10,LOC107550153,LOC107564421 coding downstream 771971 18840646 ~ 18851278 (+)
G99932 NA non-coding upstream 101252 17954485 ~ 17956630 (+)
G99934 NA non-coding upstream 124554 17932999 ~ 17933328 (+)
G99933 NA non-coding upstream 219982 17837617 ~ 17837900 (+)
G99915 NA non-coding upstream 456974 17600703 ~ 17600908 (+)
G99867 NA non-coding upstream 592368 17450084 ~ 17465514 (+)
G100005 NA non-coding downstream 228364 18297039 ~ 18298304 (+)
G100046 NA non-coding downstream 559647 18628322 ~ 18630144 (+)
G100082 NA non-coding downstream 689387 18758062 ~ 18844449 (+)
G100143 NA non-coding downstream 1052153 19120828 ~ 19125504 (+)
G100145 NA non-coding downstream 1064389 19133064 ~ 19167834 (+)
AMCG00015703 rps3a,LOC106592945 other upstream 926107 17098459 ~ 17131775 (+)
AMCG00015687 NA other upstream 1559351 16494692 ~ 16498531 (+)
AMCG00015682 NA other upstream 1600040 16433443 ~ 16457842 (+)
G99624 NA other upstream 1926495 16131044 ~ 16131387 (+)
G99541 NA other upstream 2256248 15796950 ~ 15801634 (+)
G100007 NA other downstream 251381 18320056 ~ 18325904 (+)
AMCG00015725 smad1 other downstream 676212 18744887 ~ 18771966 (+)
G100338 herc3 other downstream 2198732 20267407 ~ 20268285 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 4610162 22678837 ~ 22683895 (+)
G101061 NA other downstream 6796414 24865089 ~ 24865552 (+)

Expression


Co-expression Network