Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015734 |
| gene name | anapc10,LOC107550153,LOC107564421 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 18840646 ~ 18851278 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| anapc10 | Predicted to be involved in protein K11-linked ubiquitination. Predicted to act upstream of or within anaphase-promoting complex-dependent catabolic process and cell division. Predicted to be part of anaphase-promoting complex. Orthologous to human ANAPC10 (anaphase promoting complex subunit 10). |
| description |
|---|
| PREDICTED: anaphase-promoting complex subunit 10 |
| id | name | namespace |
|---|---|---|
| GO:0031145 | anaphase-promoting complex-dependent catabolic process | biological_process |
| GO:0030071 | regulation of mitotic metaphase/anaphase transition | biological_process |
| GO:0005680 | anaphase-promoting complex | cellular_component |
| id | description |
|---|---|
| K03357 | APC10, ANAPC10, DOC1; anaphase-promoting complex subunit 10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015734 | True | 774 | mRNA | 0.49 | 6 | 18840646 | 18851278 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015731 | NA | coding | upstream | 12631 | 18806089 ~ 18828015 (+) |
| AMCG00015727 | NA | coding | upstream | 124132 | 18689738 ~ 18716514 (+) |
| AMCG00015728 | NA | coding | upstream | 157838 | 18677818 ~ 18682808 (+) |
| AMCG00015726 | slc10a7,LOC106591891 | coding | upstream | 382476 | 18452377 ~ 18458170 (+) |
| AMCG00015715 | prmt9 | coding | upstream | 771971 | 18057882 ~ 18068675 (+) |
| AMCG00015736 | frem3,LOC106610210,LOC106610213 | coding | downstream | 206784 | 19058062 ~ 19063854 (+) |
| AMCG00015737 | frem3,LOC107725184 | coding | downstream | 248942 | 19100220 ~ 19108988 (+) |
| AMCG00015741 | NA | coding | downstream | 597628 | 19448906 ~ 19512925 (+) |
| AMCG00015742 | NA | coding | downstream | 788768 | 19640046 ~ 19671896 (+) |
| AMCG00015744 | NA | coding | downstream | 853145 | 19704423 ~ 19705094 (+) |
| G100046 | NA | non-coding | upstream | 210502 | 18628322 ~ 18630144 (+) |
| G100005 | NA | non-coding | upstream | 542342 | 18297039 ~ 18298304 (+) |
| G99932 | NA | non-coding | upstream | 884016 | 17954485 ~ 17956630 (+) |
| G99934 | NA | non-coding | upstream | 907318 | 17932999 ~ 17933328 (+) |
| G99933 | NA | non-coding | upstream | 1002746 | 17837617 ~ 17837900 (+) |
| G100143 | NA | non-coding | downstream | 269550 | 19120828 ~ 19125504 (+) |
| G100145 | NA | non-coding | downstream | 281786 | 19133064 ~ 19167834 (+) |
| G100232 | NA | non-coding | downstream | 861609 | 19712887 ~ 19713244 (+) |
| G100241 | NA | non-coding | downstream | 875294 | 19726572 ~ 19782763 (+) |
| G100349 | NA | non-coding | downstream | 1473332 | 20324610 ~ 20327167 (+) |
| AMCG00015725 | smad1 | other | upstream | 68680 | 18744887 ~ 18771966 (+) |
| G100007 | NA | other | upstream | 514742 | 18320056 ~ 18325904 (+) |
| AMCG00015703 | rps3a,LOC106592945 | other | upstream | 1708871 | 17098459 ~ 17131775 (+) |
| AMCG00015687 | NA | other | upstream | 2342115 | 16494692 ~ 16498531 (+) |
| AMCG00015682 | NA | other | upstream | 2382804 | 16433443 ~ 16457842 (+) |
| G100338 | herc3 | other | downstream | 1416129 | 20267407 ~ 20268285 (+) |
| AMCG00015796 | hspa12b,LOC107583310,LOC107697252,LOC107721672 | other | downstream | 3827559 | 22678837 ~ 22683895 (+) |
| G101061 | NA | other | downstream | 6013811 | 24865089 ~ 24865552 (+) |
| G101248 | NA | other | downstream | 7412637 | 26263915 ~ 26264308 (+) |
| G101275 | NA | other | downstream | 7521875 | 26373153 ~ 26377699 (+) |
