AMCG00015741


Basic Information

Item Value
gene id AMCG00015741
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 19448906 ~ 19512925 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015741
AAGTCTGATCCAGCCGAGGTAGTAGTCCTGGAACGATGTCACATTGTGGAGAGCGGAGATAACAGAAATGCTGCATTAAGCATCAAGTTTGAGAGCGGAGACCCAGATCTTTACCTACAAGCCTTCACAGAGTCAGACTGCAAATCCTGGATTGCAGCACTCCGAGAGGCAAACTCGGAAGGTTTGCAGAAAAAAATCCTCCACCTTCAGCAGCTCATCATGGAAATGAAAGAGAGCGAGCCGGCAGACTGCCTAGCAAGGGAAGCAACCCAGGCAGgtcCAATCCTGATTCCAAAGCTGCCACATGTGGAGTTCAGTCTAGCATGCAGGGAGCTTGCTGCCCCGGCCAGAGAAAGGAAGCCCAACGCTGTGGTGCAGGTTGctgtaataaacacacaagaGCAGAGCCTGACAGCTTACTCCAACACTGAAATAGTAGAGGGAACAAGAGACCCACTGTTTCTGACTGGTGTGACCTTCCCTCCAGAATACGCCATTTGTGAGGAAACTCGGGTCAAGCTAACGGTCTATGATGTGAAAGATAAATCACAAGAAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015741 True 558 mRNA 0.50 5 19448906 19512925

Neighbor

gene id symbol gene type direction distance location
AMCG00015737 frem3,LOC107725184 coding upstream 339918 19100220 ~ 19108988 (+)
AMCG00015736 frem3,LOC106610210,LOC106610213 coding upstream 385052 19058062 ~ 19063854 (+)
AMCG00015734 anapc10,LOC107550153,LOC107564421 coding upstream 597628 18840646 ~ 18851278 (+)
AMCG00015731 NA coding upstream 620891 18806089 ~ 18828015 (+)
AMCG00015727 NA coding upstream 732392 18689738 ~ 18716514 (+)
AMCG00015742 NA coding downstream 127121 19640046 ~ 19671896 (+)
AMCG00015744 NA coding downstream 191498 19704423 ~ 19705094 (+)
AMCG00015746 LOC106527319,LOC108251603,LOC103373330,LOC100701224,LOC102312318,LOC102313262,LOC101469181,LOC104949412 coding downstream 249876 19762801 ~ 19791302 (+)
AMCG00015745 rnf150,LOC107729769 coding downstream 300665 19813590 ~ 19821835 (+)
AMCG00015748 tbc1d9 coding downstream 354944 19867869 ~ 19905638 (+)
G100145 NA non-coding upstream 281072 19133064 ~ 19167834 (+)
G100143 NA non-coding upstream 323402 19120828 ~ 19125504 (+)
G100082 NA non-coding upstream 604457 18758062 ~ 18844449 (+)
G100046 NA non-coding upstream 818762 18628322 ~ 18630144 (+)
G100005 NA non-coding upstream 1150602 18297039 ~ 18298304 (+)
G100232 NA non-coding downstream 199962 19712887 ~ 19713244 (+)
G100241 NA non-coding downstream 213647 19726572 ~ 19782763 (+)
G100349 NA non-coding downstream 811685 20324610 ~ 20327167 (+)
G100461 NA non-coding downstream 1266421 20779346 ~ 20780467 (+)
G100483 NA non-coding downstream 1315403 20828328 ~ 20828614 (+)
AMCG00015725 smad1 other upstream 676940 18744887 ~ 18771966 (+)
G100007 NA other upstream 1123002 18320056 ~ 18325904 (+)
AMCG00015703 rps3a,LOC106592945 other upstream 2317131 17098459 ~ 17131775 (+)
AMCG00015687 NA other upstream 2950375 16494692 ~ 16498531 (+)
AMCG00015682 NA other upstream 2991064 16433443 ~ 16457842 (+)
G100338 herc3 other downstream 754482 20267407 ~ 20268285 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 3165912 22678837 ~ 22683895 (+)
G101061 NA other downstream 5352164 24865089 ~ 24865552 (+)
G101248 NA other downstream 6750990 26263915 ~ 26264308 (+)
G101275 NA other downstream 6860228 26373153 ~ 26377699 (+)

Expression


Co-expression Network