AMCG00015744


Basic Information

Item Value
gene id AMCG00015744
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 19704423 ~ 19705094 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015744
ATGGATACCCCACAGCTGACAGAAGATGAAATGGCAGAGGTCAAAAAGGAAGTTCTTGAGAGGTTGAGGCCGTATCTGTGTGAAAAAATCAAAGCTGACCGACACTTTGATTACTTGCGCTCCAGGAAGATTCTGACCAGAGAGGATACGGAAGACATCAGCTGTCGAGTAGTGAACAGCAAGAAGACTGGAAGGATGTTGGATTTTCTGGCAGAGAACCCCAAAGGTCTCGACACTCTGATTGAGTCCATCCACAAGATAGGAACCCAGGATTTTGTCATTACCAAAATAATCAATGAAATACAGAAGgtgaaaagtgaaagaaacaaagcagGAAGGTCACCTTCACCCAGAAGCACCTTTGCAGTTGATTCTGGTGTTAACATTGACACCAGTTCTACTCACAGCTCCTCACTGTACTATTCTGAGCAGCAGTGGAATCCAAATATAACATCTTTGGACTCTCTGAATCTGAGCAGCGGGGCTGGAATGGAAGTGGGAGCCCCACTCCGGAGCATCAGTCTGTCCTCAGCAGCCAGCCTCCCCAGGCCTGGAGATCTTGGGGCCCCATTGATCCCTGAAGACTCAGAAGCGGTGCCACACTCATGGAGCAGCAGTGGCAGTGATGATCAGTTTCAGACCCTGCGTTGCCATTCCCTGTTAGCTCCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015744 True 672 mRNA 0.49 1 19704423 19705094

Neighbor

gene id symbol gene type direction distance location
AMCG00015742 NA coding upstream 32527 19640046 ~ 19671896 (+)
AMCG00015741 NA coding upstream 191498 19448906 ~ 19512925 (+)
AMCG00015737 frem3,LOC107725184 coding upstream 595435 19100220 ~ 19108988 (+)
AMCG00015736 frem3,LOC106610210,LOC106610213 coding upstream 640569 19058062 ~ 19063854 (+)
AMCG00015734 anapc10,LOC107550153,LOC107564421 coding upstream 853145 18840646 ~ 18851278 (+)
AMCG00015746 LOC106527319,LOC108251603,LOC103373330,LOC100701224,LOC102312318,LOC102313262,LOC101469181,LOC104949412 coding downstream 57707 19762801 ~ 19791302 (+)
AMCG00015745 rnf150,LOC107729769 coding downstream 108496 19813590 ~ 19821835 (+)
AMCG00015748 tbc1d9 coding downstream 162775 19867869 ~ 19905638 (+)
AMCG00015747 ucp1,LOC107703842,LOC106610252 coding downstream 255450 19960544 ~ 19968342 (+)
AMCG00015756 NA coding downstream 330254 20035348 ~ 20038407 (+)
G100145 NA non-coding upstream 536589 19133064 ~ 19167834 (+)
G100143 NA non-coding upstream 578919 19120828 ~ 19125504 (+)
G100082 NA non-coding upstream 859974 18758062 ~ 18844449 (+)
G100046 NA non-coding upstream 1074279 18628322 ~ 18630144 (+)
G100005 NA non-coding upstream 1406119 18297039 ~ 18298304 (+)
G100232 NA non-coding downstream 7793 19712887 ~ 19713244 (+)
G100241 NA non-coding downstream 21478 19726572 ~ 19782763 (+)
G100349 NA non-coding downstream 619516 20324610 ~ 20327167 (+)
G100461 NA non-coding downstream 1074252 20779346 ~ 20780467 (+)
G100483 NA non-coding downstream 1123234 20828328 ~ 20828614 (+)
AMCG00015725 smad1 other upstream 932457 18744887 ~ 18771966 (+)
G100007 NA other upstream 1378519 18320056 ~ 18325904 (+)
AMCG00015703 rps3a,LOC106592945 other upstream 2572648 17098459 ~ 17131775 (+)
AMCG00015687 NA other upstream 3205892 16494692 ~ 16498531 (+)
AMCG00015682 NA other upstream 3246581 16433443 ~ 16457842 (+)
G100338 herc3 other downstream 562313 20267407 ~ 20268285 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 2973743 22678837 ~ 22683895 (+)
G101061 NA other downstream 5159995 24865089 ~ 24865552 (+)
G101248 NA other downstream 6558821 26263915 ~ 26264308 (+)
G101275 NA other downstream 6668059 26373153 ~ 26377699 (+)

Expression


Co-expression Network