AMCG00015756


Basic Information

Item Value
gene id AMCG00015756
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 20035348 ~ 20038407 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015756
ATGGTGAGCCCTTTAACTGTTGTAGATAACTTGGGAAGCAAGGAGCCCAATGACAACTGGGAACATGAACCCAAGTTGAACCGAAACAAAGTTTGCGTATCTCCAGCTAAACCCAAGCAGGACAAAACACTGGACTATGGAAAGCCCAGCAAAGCAAATATTTCTAACCCGGCTGCTTCTCCAAATGGAGATCACAATCTCCAATCCAAATCTGAAGTCATAATTGGGAAAGACATGGAATCCAGTGGAGATTTGAAAAGCATGTGCGCAAGTGACATGAAAGAAGGGCAGAGGGACAATAATGCCAATTTGAGAGTGTTACCTACAGTTCAGAAGGAGGATAATTCTAATATTAGCCAGTCAACGTCAGTCATCCAATCAAAGGCTGGTTTGCagacagaggagagggaagTGAAGGTGCAGAGTTCAGAAAAGGCATTTCAAGAACagaacacacaagcacagaacTCAGATCCAATGGGGATATCAAGGCAAGACGTTTCTCTAAAGGATACATCTTCCGAAGCTCTTCTGCCAAAAAAAGAGGCCGTCCAGTCCAAGTGCCCTGCTGCTGAATCCTCCTCACACACACCTCTGCCTTCTGGGAAAGTCACCGAAGCACCTAAATCAACAAAAGATGATCCCAAAGCTGTCCTCGCCCAGGCCAAAGCCGCTGTGGATAGCAACAGCAAATCTGCAAAGAACGAAGAAAACGTAAAACAGAAAGCTGTCCTATCAGAAGACAAATCCAAAGTCAAGGACCAGAAAGAGAGGAAGGCAGCAGGGGATTCAGGGAAGCACAAAAAGGACTTGGAGTCAAAGACCAACCAGAAGAGTTCGGGTGGGAAAACGTGCAAGCAGGAAAAGGCATCAAAGAGCATACGCGATGTCGTGTGGGATGAACAAGGGATGACATGGGAAGTTTACGGAGCTTCTCTGGATCCTGAATCCCTGGGCTTTGCCATCCAGAGTCACCTCCAGTGCAAGATCAGAGAGCATGAGAAGACAGAGAGGATCGGCAAGCAATTTGTTGTGTGA

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015756 True 1038 mRNA 0.47 3 20035348 20038407

Neighbor

gene id symbol gene type direction distance location
AMCG00015747 ucp1,LOC107703842,LOC106610252 coding upstream 67006 19960544 ~ 19968342 (+)
AMCG00015748 tbc1d9 coding upstream 129710 19867869 ~ 19905638 (+)
AMCG00015745 rnf150,LOC107729769 coding upstream 213513 19813590 ~ 19821835 (+)
AMCG00015746 LOC106527319,LOC108251603,LOC103373330,LOC100701224,LOC102312318,LOC102313262,LOC101469181,LOC104949412 coding upstream 244046 19762801 ~ 19791302 (+)
AMCG00015744 NA coding upstream 330254 19704423 ~ 19705094 (+)
AMCG00015754 NA coding downstream 72298 20110705 ~ 20111939 (+)
AMCG00015757 NA coding downstream 98281 20136688 ~ 20145630 (+)
AMCG00015758 NA coding downstream 145782 20184189 ~ 20225089 (+)
AMCG00015759 NA coding downstream 236536 20274943 ~ 20299858 (+)
AMCG00015765 NA coding downstream 446480 20484887 ~ 20501432 (+)
G100241 NA non-coding upstream 252585 19726572 ~ 19782763 (+)
G100232 NA non-coding upstream 322104 19712887 ~ 19713244 (+)
G100145 NA non-coding upstream 867514 19133064 ~ 19167834 (+)
G100143 NA non-coding upstream 909844 19120828 ~ 19125504 (+)
G100082 NA non-coding upstream 1190899 18758062 ~ 18844449 (+)
G100349 NA non-coding downstream 286203 20324610 ~ 20327167 (+)
G100461 NA non-coding downstream 740939 20779346 ~ 20780467 (+)
G100483 NA non-coding downstream 789921 20828328 ~ 20828614 (+)
G100502 NA non-coding downstream 1025643 21064050 ~ 21065385 (+)
G100507 NA non-coding downstream 1268199 21306606 ~ 21310605 (+)
AMCG00015725 smad1 other upstream 1263382 18744887 ~ 18771966 (+)
G100007 NA other upstream 1709444 18320056 ~ 18325904 (+)
AMCG00015703 rps3a,LOC106592945 other upstream 2903573 17098459 ~ 17131775 (+)
AMCG00015687 NA other upstream 3536817 16494692 ~ 16498531 (+)
AMCG00015682 NA other upstream 3577506 16433443 ~ 16457842 (+)
G100338 herc3 other downstream 229000 20267407 ~ 20268285 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 2640430 22678837 ~ 22683895 (+)
G101061 NA other downstream 4826682 24865089 ~ 24865552 (+)
G101248 NA other downstream 6225508 26263915 ~ 26264308 (+)
G101275 NA other downstream 6334746 26373153 ~ 26377699 (+)

Expression


Co-expression Network