AMCG00015782


Basic Information

Item Value
gene id AMCG00015782
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 21227280 ~ 21229655 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015782
ATGAGCTGTTCTGTACGGTTCAGCATCCCCGCAGCAGGCACACAAGCAGGTGAGGAGACCCCTATTGTCTCCAAGAGCAACATCAAGGAATACAAGGACAGCTTCTCCAATGAGAAGTTTGACTTTCGCAACAATCCTAACATCACCTTTTATGTGTATGTCAGCAACTTCACCTGGCCGATTAAAATACAGAGCATCTCAAAGTGCCACGCGGTGCCCCCCGGCTGCGCCAGCATTGGCCCTTACTCCCCAGGCAGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015782 True 261 mRNA 0.51 3 21227280 21229655

Neighbor

gene id symbol gene type direction distance location
AMCG00015781 atrn coding upstream 2701 21157154 ~ 21224579 (+)
AMCG00015779 NA coding upstream 174138 21046770 ~ 21053142 (+)
AMCG00015774 NA coding upstream 423426 20802997 ~ 20803854 (+)
AMCG00015775 NA coding upstream 424347 20802697 ~ 20802933 (+)
AMCG00015773 smyd5 coding upstream 452660 20760830 ~ 20774620 (+)
AMCG00015786 NA coding downstream 816294 22045949 ~ 22065359 (+)
AMCG00015787 NA coding downstream 873463 22103118 ~ 22146071 (+)
AMCG00015788 NA coding downstream 936576 22166231 ~ 22178257 (+)
AMCG00015795 cct7,LOC102781788 coding downstream 1431406 22661061 ~ 22664968 (+)
AMCG00015797 NA coding downstream 1477533 22707188 ~ 22715143 (+)
G100502 NA non-coding upstream 161895 21064050 ~ 21065385 (+)
G100483 NA non-coding upstream 398666 20828328 ~ 20828614 (+)
G100461 NA non-coding upstream 446813 20779346 ~ 20780467 (+)
G100349 NA non-coding upstream 900113 20324610 ~ 20327167 (+)
G100241 NA non-coding upstream 1444517 19726572 ~ 19782763 (+)
G100507 NA non-coding downstream 76951 21306606 ~ 21310605 (+)
G100568 NA non-coding downstream 584716 21814371 ~ 21814715 (+)
G100639 NA non-coding downstream 1058968 22288623 ~ 22288848 (+)
G100641 NA non-coding downstream 1216719 22446374 ~ 22449216 (+)
G100707 NA non-coding downstream 1590846 22820501 ~ 22820703 (+)
G100338 herc3 other upstream 958995 20267407 ~ 20268285 (+)
AMCG00015725 smad1 other upstream 2455314 18744887 ~ 18771966 (+)
G100007 NA other upstream 2901376 18320056 ~ 18325904 (+)
AMCG00015703 rps3a,LOC106592945 other upstream 4095505 17098459 ~ 17131775 (+)
AMCG00015687 NA other upstream 4728749 16494692 ~ 16498531 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 1449182 22678837 ~ 22683895 (+)
G101061 NA other downstream 3635434 24865089 ~ 24865552 (+)
G101248 NA other downstream 5034260 26263915 ~ 26264308 (+)
G101275 NA other downstream 5143498 26373153 ~ 26377699 (+)
G101400 NA other downstream 6660897 27890552 ~ 27992014 (+)

Expression


Co-expression Network