Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015811 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 22948662 ~ 22958584 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0090504 | epiboly | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015811 | True | 1125 | mRNA | 0.55 | 11 | 22948662 | 22958584 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015806 | NA | coding | upstream | 28223 | 22919180 ~ 22920439 (+) |
| AMCG00015807 | NA | coding | upstream | 41520 | 22894764 ~ 22907142 (+) |
| AMCG00015801 | NA | coding | upstream | 73859 | 22850804 ~ 22874803 (+) |
| AMCG00015794 | NA | coding | upstream | 181176 | 22758135 ~ 22767486 (+) |
| AMCG00015797 | NA | coding | upstream | 233519 | 22707188 ~ 22715143 (+) |
| AMCG00015810 | NA | coding | downstream | 18336 | 22976920 ~ 22979992 (+) |
| AMCG00015813 | NA | coding | downstream | 151688 | 23110272 ~ 23116783 (+) |
| AMCG00015817 | NA | coding | downstream | 176994 | 23135578 ~ 23145714 (+) |
| AMCG00015818 | NA | coding | downstream | 192469 | 23151053 ~ 23157262 (+) |
| AMCG00015815 | vax2,LOC107572133,LOC107755639 | coding | downstream | 217048 | 23175632 ~ 23180916 (+) |
| G100709 | NA | non-coding | upstream | 25266 | 22835254 ~ 22923396 (+) |
| G100707 | NA | non-coding | upstream | 127959 | 22820501 ~ 22820703 (+) |
| G100641 | NA | non-coding | upstream | 499446 | 22446374 ~ 22449216 (+) |
| G100639 | NA | non-coding | upstream | 659814 | 22288623 ~ 22288848 (+) |
| G100568 | NA | non-coding | upstream | 1133947 | 21814371 ~ 21814715 (+) |
| G100776 | NA | non-coding | downstream | 257467 | 23216051 ~ 23218316 (+) |
| G100801 | NA | non-coding | downstream | 325107 | 23283691 ~ 23284077 (+) |
| G100858 | NA | non-coding | downstream | 803707 | 23762291 ~ 23762523 (+) |
| G100863 | NA | non-coding | downstream | 881214 | 23839798 ~ 23961637 (+) |
| G100903 | NA | non-coding | downstream | 1112242 | 24070826 ~ 24156851 (+) |
| AMCG00015796 | hspa12b,LOC107583310,LOC107697252,LOC107721672 | other | upstream | 264767 | 22678837 ~ 22683895 (+) |
| G100338 | herc3 | other | upstream | 2680377 | 20267407 ~ 20268285 (+) |
| AMCG00015725 | smad1 | other | upstream | 4176696 | 18744887 ~ 18771966 (+) |
| G100007 | NA | other | upstream | 4622758 | 18320056 ~ 18325904 (+) |
| AMCG00015703 | rps3a,LOC106592945 | other | upstream | 5816887 | 17098459 ~ 17131775 (+) |
| G101061 | NA | other | downstream | 1906505 | 24865089 ~ 24865552 (+) |
| G101248 | NA | other | downstream | 3305331 | 26263915 ~ 26264308 (+) |
| G101275 | NA | other | downstream | 3414569 | 26373153 ~ 26377699 (+) |
| G101400 | NA | other | downstream | 4931968 | 27890552 ~ 27992014 (+) |
| AMCG00015901 | NA | other | downstream | 5618916 | 28577500 ~ 28580829 (+) |
