AMCG00015817


Basic Information

Item Value
gene id AMCG00015817
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 23135578 ~ 23145714 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015817
ACAGACCATGTGCCAATCAGGCTGAACAACACAACCATCCTGAGAGAGGGCGCCCTCTACAGCCGCAAAGTGGAGGAGGAGCTGCGCAGGATGGAGCAGTTGACCGAGGGTGCCGGGGATTCGGGGCGCTTCCTGCGGTGGCAACAGGAGATGAGGGAGCGGGACCTGCAGCAGGAGCTGGCAGAGCTGGAGCGACGGCGTTTGGCGGGCAGGATCAGCCACGAGGAGGCCGTGCTGGCCCGACACAGGATCATGCAGCGCAACCAGGCCAGGGCTCACCTCAAGAAGCAGGAGACTGCCGAGCTGATGCGCCGCTATGCAGAACAAcgcctggaggaggagaaggagatgagGGAGCTGGTGGAGCAGGTGGTGGAGGGACATAAGAACACCAAGGTGGCCAAGATGCGGTTGCAGGAGTACAAACAGCGCATAGtgcaggAGGTGTCGGAGCAGAGTCATGAGATGCTGCGCCAGGCCCTGGAGGAGGCCCAGGCTGAGCTCAGCAGGAAGTTCGAGCTGATCCGCGAGATCCGCGCGCTCGAGGCCGTGCCACCTATCCGACACAAGTTTGTGGACCTGACCGAGGCAAGTGCGCATCTTTCCGCCGGTGGGTCACCAGTGCTTCCTCACAGGGGCTGTACCGGGGGCTATGCTCTGCTGGGGGAGATGTCTTTGCTGGAGCTACGTGAGAGGCTGGCTCGGCTGAGGGAGGcagagcagcaggaggaggaggagaggagggacaAGATCCTGGAGGAAAAACGCACCAAGGAGCAGCTACTGCTGGACCAACTGGACCACATCGCCCTGCACAGGGCTGCCCTGGCCCGGGCTGCCACCCTCAGgaaggagaagaaggCCAAGTCTCTGGCCCAGAAAGGCACTATAAAGGACGAGCGTGTGGTCGAGCTGCAGAGGAAGCTGGAGGAGAAGCGCCAGGAGAGAcggaggcaggaggagagcctgaaGATGAAGACGGGCAAGGGCACAGCACAGTCTCACCGACCCTGGAAAGACAGGAAGGGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015817 True 1032 mRNA 0.62 7 23135578 23145714

Neighbor

gene id symbol gene type direction distance location
AMCG00015813 NA coding upstream 18795 23110272 ~ 23116783 (+)
AMCG00015810 NA coding upstream 155586 22976920 ~ 22979992 (+)
AMCG00015811 NA coding upstream 176994 22948662 ~ 22958584 (+)
AMCG00015806 NA coding upstream 215139 22919180 ~ 22920439 (+)
AMCG00015807 NA coding upstream 228436 22894764 ~ 22907142 (+)
AMCG00015818 NA coding downstream 5339 23151053 ~ 23157262 (+)
AMCG00015815 vax2,LOC107572133,LOC107755639 coding downstream 29918 23175632 ~ 23180916 (+)
AMCG00015819 NA coding downstream 66966 23212680 ~ 23229248 (+)
AMCG00015816 NA coding downstream 110376 23256090 ~ 23273675 (+)
AMCG00015814 tex261 coding downstream 130242 23275956 ~ 23281282 (+)
G100709 NA non-coding upstream 212182 22835254 ~ 22923396 (+)
G100707 NA non-coding upstream 314875 22820501 ~ 22820703 (+)
G100641 NA non-coding upstream 686362 22446374 ~ 22449216 (+)
G100639 NA non-coding upstream 846730 22288623 ~ 22288848 (+)
G100568 NA non-coding upstream 1320863 21814371 ~ 21814715 (+)
G100776 NA non-coding downstream 70337 23216051 ~ 23218316 (+)
G100801 NA non-coding downstream 137977 23283691 ~ 23284077 (+)
G100858 NA non-coding downstream 616577 23762291 ~ 23762523 (+)
G100863 NA non-coding downstream 694084 23839798 ~ 23961637 (+)
G100903 NA non-coding downstream 925112 24070826 ~ 24156851 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other upstream 451683 22678837 ~ 22683895 (+)
G100338 herc3 other upstream 2867293 20267407 ~ 20268285 (+)
AMCG00015725 smad1 other upstream 4363612 18744887 ~ 18771966 (+)
G100007 NA other upstream 4809674 18320056 ~ 18325904 (+)
AMCG00015703 rps3a,LOC106592945 other upstream 6003803 17098459 ~ 17131775 (+)
G101061 NA other downstream 1719375 24865089 ~ 24865552 (+)
G101248 NA other downstream 3118201 26263915 ~ 26264308 (+)
G101275 NA other downstream 3227439 26373153 ~ 26377699 (+)
G101400 NA other downstream 4744838 27890552 ~ 27992014 (+)
AMCG00015901 NA other downstream 5431786 28577500 ~ 28580829 (+)

Expression


Co-expression Network