Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015835 |
| gene name | LOC107554395,LOC105892576,LOC104947301 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 24345624 ~ 24353418 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: vacuolar protein sorting-associated protein 37A-like |
| id | name | namespace |
|---|---|---|
| GO:0007626 | locomotory behavior | biological_process |
| id | description |
|---|---|
| K12185 | VPS37; ESCRT-I complex subunit VPS37 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015835 | True | 1302 | mRNA | 0.47 | 11 | 24345624 | 24353418 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015834 | NA | coding | upstream | 39531 | 24290369 ~ 24306093 (+) |
| AMCG00015833 | micu3,LOC107562929,LOC107656542,LOC107747394,LOC102779354,LOC101479276 | coding | upstream | 79793 | 24237820 ~ 24265831 (+) |
| AMCG00015830 | tusc3 | coding | upstream | 347615 | 23989239 ~ 23998009 (+) |
| AMCG00015829 | NA | coding | upstream | 584998 | 23747430 ~ 23760626 (+) |
| AMCG00015822 | NA | coding | upstream | 611944 | 23713609 ~ 23733680 (+) |
| AMCG00015837 | NA | coding | downstream | 61706 | 24415124 ~ 24439833 (+) |
| AMCG00015836 | NA | coding | downstream | 89219 | 24442637 ~ 24452889 (+) |
| AMCG00015842 | NA | coding | downstream | 205707 | 24559125 ~ 24594041 (+) |
| AMCG00015846 | NA | coding | downstream | 980598 | 25334016 ~ 25337276 (+) |
| AMCG00015845 | NA | coding | downstream | 1020497 | 25373915 ~ 25405589 (+) |
| G100903 | NA | non-coding | upstream | 188773 | 24070826 ~ 24156851 (+) |
| G100863 | NA | non-coding | upstream | 383987 | 23839798 ~ 23961637 (+) |
| G100858 | NA | non-coding | upstream | 583101 | 23762291 ~ 23762523 (+) |
| G100801 | NA | non-coding | upstream | 1061547 | 23283691 ~ 23284077 (+) |
| G100776 | NA | non-coding | upstream | 1127308 | 23216051 ~ 23218316 (+) |
| G100956 | NA | non-coding | downstream | 131411 | 24484829 ~ 24549300 (+) |
| G100962 | NA | non-coding | downstream | 175342 | 24528760 ~ 24537309 (+) |
| G100998 | asah1,LOC102779657 | non-coding | downstream | 243056 | 24596474 ~ 24597817 (+) |
| G101029 | frg1,LOC107721419,LOC107702291,LOC107554393,LOC107656998,LOC107747397,LOC102296826 | non-coding | downstream | 249884 | 24603302 ~ 24608554 (+) |
| G101069 | NA | non-coding | downstream | 757380 | 25110798 ~ 25111058 (+) |
| AMCG00015796 | hspa12b,LOC107583310,LOC107697252,LOC107721672 | other | upstream | 1661729 | 22678837 ~ 22683895 (+) |
| G100338 | herc3 | other | upstream | 4077339 | 20267407 ~ 20268285 (+) |
| AMCG00015725 | smad1 | other | upstream | 5573658 | 18744887 ~ 18771966 (+) |
| G100007 | NA | other | upstream | 6019720 | 18320056 ~ 18325904 (+) |
| AMCG00015703 | rps3a,LOC106592945 | other | upstream | 7213849 | 17098459 ~ 17131775 (+) |
| G101061 | NA | other | downstream | 511671 | 24865089 ~ 24865552 (+) |
| G101248 | NA | other | downstream | 1910497 | 26263915 ~ 26264308 (+) |
| G101275 | NA | other | downstream | 2019735 | 26373153 ~ 26377699 (+) |
| G101400 | NA | other | downstream | 3537134 | 27890552 ~ 27992014 (+) |
| AMCG00015901 | NA | other | downstream | 4224082 | 28577500 ~ 28580829 (+) |
