Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015867 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 26333482 ~ 26356094 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0019695 | choline metabolic process | biological_process |
| GO:0016042 | lipid catabolic process | biological_process |
| GO:0031225 | anchored component of membrane | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0047390 | glycerophosphocholine cholinephosphodiesterase activity | molecular_function |
| id | description |
|---|---|
| K08743 | ENPP6; ectonucleotide pyrophosphatase/phosphodiesterase family member 6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015867 | True | 1335 | mRNA | 0.50 | 9 | 26333482 | 26356094 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015872 | NA | coding | upstream | 24750 | 26306627 ~ 26308732 (+) |
| AMCG00015870 | NA | coding | upstream | 27688 | 26270391 ~ 26305794 (+) |
| AMCG00015868 | NA | coding | upstream | 71993 | 26254913 ~ 26261489 (+) |
| AMCG00015869 | NA | coding | upstream | 80236 | 26242131 ~ 26253246 (+) |
| AMCG00015873 | NA | coding | upstream | 99407 | 26227686 ~ 26234075 (+) |
| AMCG00015875 | NA | coding | downstream | 165096 | 26521190 ~ 26525630 (+) |
| AMCG00015876 | NA | coding | downstream | 171016 | 26527110 ~ 26562104 (+) |
| AMCG00015877 | NA | coding | downstream | 206627 | 26562721 ~ 26567558 (+) |
| AMCG00015882 | dctd,LOC107671033,LOC107550883,LOC106602441 | coding | downstream | 316650 | 26672744 ~ 26699429 (+) |
| AMCG00015886 | NA | coding | downstream | 1461742 | 27817836 ~ 27840281 (+) |
| G101116 | NA | non-coding | upstream | 607904 | 25667828 ~ 25725578 (+) |
| G101107 | NA | non-coding | upstream | 837563 | 25420890 ~ 25495919 (+) |
| G101088 | NA | non-coding | upstream | 923833 | 25408665 ~ 25409649 (+) |
| G101087 | LOC107575789 | non-coding | upstream | 924946 | 25388061 ~ 25408536 (+) |
| G101069 | NA | non-coding | upstream | 1222424 | 25110798 ~ 25111058 (+) |
| G101270 | NA | non-coding | downstream | 8201 | 26364295 ~ 26365059 (+) |
| G101271 | NA | non-coding | downstream | 11503 | 26367597 ~ 26367905 (+) |
| G101272 | NA | non-coding | downstream | 13391 | 26369485 ~ 26369703 (+) |
| G101273 | NA | non-coding | downstream | 13998 | 26370092 ~ 26370326 (+) |
| G101282 | NA | non-coding | downstream | 118966 | 26475060 ~ 26475349 (+) |
| G101248 | NA | other | upstream | 69174 | 26263915 ~ 26264308 (+) |
| G101061 | NA | other | upstream | 1467930 | 24865089 ~ 24865552 (+) |
| AMCG00015796 | hspa12b,LOC107583310,LOC107697252,LOC107721672 | other | upstream | 3649587 | 22678837 ~ 22683895 (+) |
| G100338 | herc3 | other | upstream | 6065197 | 20267407 ~ 20268285 (+) |
| AMCG00015725 | smad1 | other | upstream | 7561516 | 18744887 ~ 18771966 (+) |
| G101275 | NA | other | downstream | 17059 | 26373153 ~ 26377699 (+) |
| G101400 | NA | other | downstream | 1534458 | 27890552 ~ 27992014 (+) |
| AMCG00015901 | NA | other | downstream | 2221406 | 28577500 ~ 28580829 (+) |
| AMCG00015918 | g3bp2,LOC106578160,LOC107714642,LOC106610282 | other | downstream | 3267951 | 29624045 ~ 29652938 (+) |
| G101752 | NA | other | downstream | 3809934 | 30166028 ~ 30168289 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
