AMCG00015873


Basic Information

Item Value
gene id AMCG00015873
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 26227686 ~ 26234075 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015873
ATGGATCAGGACTTGGTCCCCACACAGAAGTATGTGTCCCCCTCATCCCCAAATGTATCGGCAATCCCGAAAAGCAGTTTTCTGGATGAAATTGAAAGCTACGATGTCCCGCTCCACAGCACTGCGCTCGAGGAGGAGTTAAATACGCAGAAGGAAGAAGCGAAGGGACAGCGGGTGCCCAATAAGGTGGCAGTGACACAGAGGAAAGGGCAGGCACCGGGGCCGAAGACGCAAAGGAAGAGCCAAGCGAATCCTCTTACGACACCGAGGAGAGCCAAAGTATTGGCACCGAGGTCCTCGAAGAAAAGTGAGAAAGTTTCGAAGGAGCCGGAAAGTAAAAGAGAAGCAGCTCCAGTAAAGAGAAATGTGGCGACACGTCGGGAGACCACACAATCGAAGACCCCAAGAAATCCAAAGCGAACCCGGCCACTGCGTGATGTTTCTGAGGAGTCTGAAAGAGACGAAGCGACTGATTTGGAAAATGTGCACAAAGCTACAGAGAGGCGAGATGCTGCTGCACCGATAGCGTCCCAGAGACGGCCAGGCCACAGCCGGCAGTCCGGGCCTGCGAAGGGCAAAGGGCCACTGCTCACTCCAGGCACAAAGGCTGCTGGGAAGAAATCCACAACACTGGCACTGCGCAAAAGGGGACGAGCGCCTTCTCCAGTCGAGGACTCCTCTGCGTCAGACAGCCCGGAGGACAGCCAGACTGCGGAGGGCAGCCGCTGGGGAAGTGGCAGTGGACAGCAGAGTGAAGCGTCTCCTGCGAAGAGACGCGTGAGCACCAAGCCTTctacgcagagagagagacagagaagccGGCTGCCTTCAGAGCCCAACACTCAAGATGACCATAACTTGGAGACCAAGCCTCATAAGAAGAGGGCAAAACCCCAGAGAAGGAAGTCTTCAGTCACACCCACAGaaaCTGCCAGTCCCTCCAGAGTGAAGAAAAATCCCAAAGCTCTCTCGGAGATGGACGTGGTGCTGGAAGCGTTCCGAGAGTGTGTCTCGGAGTATACGGAGACCATTCCCACGAGTGCCAAACATGCAGCTGAATCCTTTTCCCGCAGGGTTGAGGCAGAGCTGACTGAAATGATAACTATGACAAAGGAGCTCAATTACATGGAACGGGAAAAGCGCAAGGTTAACATTGCTATTAATCGTAAACGAACACGACTTCTAGaggtaaaaaatgaattaataagGAAGAAAGCAGAGCTGCGGAAACTGCAGAAAGAATCGGATCAGCTGACCGAGAGAGAGACCCACCTACACAAGGGCACCGCGTTGCTCACAGACCTGAAGGCCCTGCAGACTAAATACCTGCAGCACAGGACGAGTCATCCCCAGGAGAGAGAAGTGTACGGTGCTTCCAGCCTCCCGTCTCTGCTCTTGGCATCCCGGACTGTACTGGGTGCTGAAGGGCAGCTGAAGAATATCAATAACAATCTGCAGCAGGCGCTCAACCAATCCAACGTGAAATAA

Function

GO: NA

KEGG:

id description
K11513 MLF1IP, CENPU; centromere protein U

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015873 True 1488 mRNA 0.54 12 26227686 26234075

Neighbor

gene id symbol gene type direction distance location
AMCG00015866 NA coding upstream 3505 26196664 ~ 26224181 (+)
AMCG00015851 NA coding upstream 58836 26163234 ~ 26168850 (+)
AMCG00015852 NA coding upstream 77363 26138109 ~ 26150323 (+)
AMCG00015854 NA coding upstream 98352 26120808 ~ 26129334 (+)
AMCG00015853 NA coding upstream 166601 26056102 ~ 26061085 (+)
AMCG00015869 NA coding downstream 8056 26242131 ~ 26253246 (+)
AMCG00015868 NA coding downstream 20838 26254913 ~ 26261489 (+)
AMCG00015870 NA coding downstream 36316 26270391 ~ 26305794 (+)
AMCG00015872 NA coding downstream 72552 26306627 ~ 26308732 (+)
AMCG00015867 NA coding downstream 99407 26333482 ~ 26356094 (+)
G101116 NA non-coding upstream 502108 25667828 ~ 25725578 (+)
G101107 NA non-coding upstream 731767 25420890 ~ 25495919 (+)
G101088 NA non-coding upstream 818037 25408665 ~ 25409649 (+)
G101087 LOC107575789 non-coding upstream 819150 25388061 ~ 25408536 (+)
G101069 NA non-coding upstream 1116628 25110798 ~ 25111058 (+)
G101270 NA non-coding downstream 130220 26364295 ~ 26365059 (+)
G101271 NA non-coding downstream 133522 26367597 ~ 26367905 (+)
G101272 NA non-coding downstream 135410 26369485 ~ 26369703 (+)
G101273 NA non-coding downstream 136017 26370092 ~ 26370326 (+)
G101282 NA non-coding downstream 240985 26475060 ~ 26475349 (+)
G101061 NA other upstream 1362134 24865089 ~ 24865552 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other upstream 3543791 22678837 ~ 22683895 (+)
G100338 herc3 other upstream 5959401 20267407 ~ 20268285 (+)
AMCG00015725 smad1 other upstream 7455720 18744887 ~ 18771966 (+)
G100007 NA other upstream 7901782 18320056 ~ 18325904 (+)
G101248 NA other downstream 29840 26263915 ~ 26264308 (+)
G101275 NA other downstream 139078 26373153 ~ 26377699 (+)
G101400 NA other downstream 1656477 27890552 ~ 27992014 (+)
AMCG00015901 NA other downstream 2343425 28577500 ~ 28580829 (+)
AMCG00015918 g3bp2,LOC106578160,LOC107714642,LOC106610282 other downstream 3389970 29624045 ~ 29652938 (+)

Expression


Co-expression Network