AMCG00015897


Basic Information

Item Value
gene id AMCG00015897
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 28396972 ~ 28399528 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015897
CATTTCTGCACTCGCCGCACCAGCCTGTGTACACGGCCACAAAGTACGGGGTCGTTGGATTCACACGAGCCATGGCTggTGCTGCTGAACTAGGAAACTACGGCGTGAGGATTAATGTACTGTGCCCAGGATTTGTCGACACTCCACTCCTCCAATCAGTGGACAATGAAGACAACATGGGGAAATTCATCAAGTATAAGGAcgatataaagaaaataatggatATTTACGGAGTACTGCCGCCATCTGTAATTGCTGAAGGAATGCTGAGGATCATCACAGACGACACTTTGAACGGAGCAGTCATGAAAATTACCTCGTCCAAAGGGATTCACTTTGAGAATTATGAACCACTGTCCGCA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015897 True 362 mRNA 0.47 3 28396972 28399528

Neighbor

gene id symbol gene type direction distance location
AMCG00015894 NA coding upstream 10284 28384914 ~ 28386688 (+)
AMCG00015896 glra3,LOC106610166,LOC106602381 coding upstream 24310 28339412 ~ 28372662 (+)
AMCG00015893 LOC106610164,LOC106602380 coding upstream 229895 28148894 ~ 28167077 (+)
AMCG00015889 NA coding upstream 355975 28037811 ~ 28040997 (+)
AMCG00015890 NA coding upstream 378076 28006084 ~ 28018896 (+)
AMCG00015895 fbxo8,LOC107670846,LOC107752227 coding downstream 32510 28432038 ~ 28441312 (+)
AMCG00015900 hand2,LOC107558779,LOC107676684,LOC106610170,LOC106602386,LOC107752229,LOC107552491 coding downstream 141522 28541050 ~ 28543529 (+)
AMCG00015902 hmgb2,LOC104945199 coding downstream 186897 28586425 ~ 28588280 (+)
AMCG00015908 NA coding downstream 679901 29079429 ~ 29107579 (+)
AMCG00015912 NA coding downstream 791578 29191106 ~ 29195801 (+)
G101404 NA non-coding upstream 400026 27995810 ~ 27996946 (+)
G101387 NA non-coding upstream 727219 27669432 ~ 27669753 (+)
G101381 NA non-coding upstream 955729 27441027 ~ 27441243 (+)
G101340 NA non-coding upstream 1689871 26706876 ~ 26707101 (+)
G101320 NA non-coding upstream 1817001 26579713 ~ 26579971 (+)
G101486 NA non-coding downstream 46388 28445916 ~ 28446217 (+)
G101504 NA non-coding downstream 190045 28589573 ~ 28591059 (+)
G101555 NA non-coding downstream 767407 29166935 ~ 29167213 (+)
G101556 NA non-coding downstream 775249 29174777 ~ 29177324 (+)
G101558 NA non-coding downstream 783003 29182531 ~ 29182869 (+)
G101400 NA other upstream 404958 27890552 ~ 27992014 (+)
G101275 NA other upstream 2019273 26373153 ~ 26377699 (+)
G101248 NA other upstream 2132664 26263915 ~ 26264308 (+)
G101061 NA other upstream 3531420 24865089 ~ 24865552 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other upstream 5713077 22678837 ~ 22683895 (+)
AMCG00015901 NA other downstream 177972 28577500 ~ 28580829 (+)
AMCG00015918 g3bp2,LOC106578160,LOC107714642,LOC106610282 other downstream 1224517 29624045 ~ 29652938 (+)
G101752 NA other downstream 1766500 30166028 ~ 30168289 (+)
G101870 NA other downstream 2404561 30804089 ~ 30809238 (+)
G101930 NA other downstream 2862933 31262461 ~ 31287766 (+)

Expression


Co-expression Network