AMCG00015911


Basic Information

Item Value
gene id AMCG00015911
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 29252886 ~ 29259988 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015911
TCATGGAGGCTAAACCAATAGAAATGAGTGCCCTGGGCCGACCCCTGTACCCAGGCATGCTGTATGACTGCCGCGACGACTCCTTCATCCCAGGTGTCACCCTGTGGGATATAGAAGCTGTTCGCAAAGACCTGGATGTACATCCAAAACCCAACATGGAGATCAACATCACAGCATCCGACTCCCTCCATGAGAAGTCCAGTCTGTTGGACGTGAGCGCTTCCCTGAAGGCCAGCTTCCTGGGGGGGCTGGTGGAGGTGGGAGGGTCGGCCAGGTATCTGAATGACACTGTCTCCTCCACACAACAGTGCAGGGTCACCATGCAGTACAAGCAGACCACAGAGTTTAAGCAGCTGACCATGACCCATCTGGGCAAGGTGTCGTATCCTGAAGTATTTGAGAAGAAGACGGCCACTCATGTCATCACGGCCGTGCTGTACGGAGCCCAGGCCTTCTTGGTATTCAATCAGACAGCTTCTAAAAATGAAAGTAAGCAGGACATCCAGGGAAACCTGCACGTGATGGTCAAGAAGATACCCTTATTCTCCATCGAAGGCGAGGGAGCTCTGAAAATGACAGAAGAAGACAAGAAGAAGGTGCAGGAGTTCAGCTGCAAGTTCTATGGTGATTTCCAACTGAAACAGAACCCCACCACTTATCTGGAAGCTGTCCAAGTGTACAGCAAACTCCCAGAGCTGCtgggagagaagggggagaaGGCTGTGCCGGTGAGAGTGTGGCTGTATCCTCTGATTGACCTGGACTCCAATGCAGCTCGGCTGGTGCGAGAGATTAGTGTGAGTCTGGTGTCAGAGGCTGAGAAAGTGCTGGAGCAGCTTGCGGAGGCCTACGTGAGAAGCAACAGCTTGATCTCCAACAATTTGGTCAGCCACTTTACAGATCTGAAAAACAAGCTGGAAGATTTCCAAGGCAAGTTCGAGCCATACAAGGAGATTTTCCAGAAAGCTCTGTCCAGAATCCTGCCGGCCATACGGGGGGGTGGGAAGGAGGAGCAGGCATTGGTTGACATCCTGCAGGTCCATCACAAGTCACCCTTGACCCACAAACAAATGGAGGAGTGGCTAGATGACAAAGATGATGAGATACAGGTGTTGAGATCCTACACTGTTACAATGAAGAGCATCCCTATTGTATCAACTGCTGAGCTCCAAGGAGTCCTCTTTGATCCCCAAATAGACAGTGTCTTCTGCTTTGCCTTCACCTCACTGAAGTACAAAGACCAATACCTCTCAACACTGACTCAGTACCTCCAGTCCGAGGAGTTCAGGAAACTGGAAACTTCAGGGTCAGTCCTGAACTACCTAAAAGAGGAGCCTCAGCCATGGTTCAAGTCACCTGAGCTCTCAGCCTCAATGAGAGTGAACCTTCAGCTGTTCACAGAATTTTCAAAGGCCAATATGGATGAGGAGAGAACCAAGTTTGTGATCACTTCCATCTCAGACCCCTCTAATCCTGGAGCATCCATCCGCTTGTATCGCCGCGGGAAACTAGAGGATCCCCAATTCAAGCCTGTATCAAAGCCGCCCCCACTTGACTTAACTGACATTCAGTGTGACCAAGTGACCCTGAAGCTGCTACCATCCCCGACTGGAAAGACTGAACGATACAGAGTGGAGCACAGAGCAGTGCAGACAGGGGATAAAACAGGCACAAAGCCAGAGGAGCAGCAGTGGACGGTCACTGATACACCTGACACACAAGAGACCTGGACTCTGTCAGGGCTAAAGCCAGCCACGCTCTACCAGGTCAGGTACAGAGTGATCAGTGCTATGGGAGTGAGCAAGGAGAGTGACACCACTGAGATCTCGACCAAACCTGACCACACAGGCCCACAAGAGCTTTCAGTAAAAAGAGTAGGGCTGCGGAAAGTTGAAGCCACATGGAAGATACCAGTTCCCCCTGAGCAGAGTGTGCTTTGGTATAGCGTTGAATATAAAGATGAAACAAGTGAGGGTTGGCTGGCAAAAATGACAAAGCCCCATCAGGGCATTTGCACAATAGAGGGACTGAAGTACACCAACTCCTACAGATTCAGGGTGCGCCCTATCTCTGAGGCAGCATGCCAAGAGGCTGAGCTTCCACCTCTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015911 True 2111 mRNA 0.51 2 29252886 29259988

Neighbor

gene id symbol gene type direction distance location
AMCG00015912 NA coding upstream 57085 29191106 ~ 29195801 (+)
AMCG00015908 NA coding upstream 145307 29079429 ~ 29107579 (+)
AMCG00015902 hmgb2,LOC104945199 coding upstream 664606 28586425 ~ 28588280 (+)
AMCG00015900 hand2,LOC107558779,LOC107676684,LOC106610170,LOC106602386,LOC107752229,LOC107552491 coding upstream 709357 28541050 ~ 28543529 (+)
AMCG00015895 fbxo8,LOC107670846,LOC107752227 coding upstream 811574 28432038 ~ 28441312 (+)
AMCG00015913 NA coding downstream 80496 29340484 ~ 29352375 (+)
AMCG00015915 NA coding downstream 140523 29400511 ~ 29409924 (+)
AMCG00015914 NA coding downstream 222281 29482269 ~ 29486582 (+)
AMCG00015917 NA coding downstream 289616 29549604 ~ 29551097 (+)
AMCG00015916 NA coding downstream 312513 29572501 ~ 29578835 (+)
G101560 NA non-coding upstream 66559 29186105 ~ 29186327 (+)
G101558 NA non-coding upstream 70017 29182531 ~ 29182869 (+)
G101556 NA non-coding upstream 75562 29174777 ~ 29177324 (+)
G101555 NA non-coding upstream 85673 29166935 ~ 29167213 (+)
G101504 NA non-coding upstream 661827 28589573 ~ 28591059 (+)
G101638 NA non-coding downstream 318541 29578529 ~ 29595891 (+)
G101678 NA non-coding downstream 445989 29705977 ~ 29728715 (+)
G101848 NA non-coding downstream 1335090 30595078 ~ 30641350 (+)
G101935 NA non-coding downstream 2013184 31273172 ~ 31316692 (+)
G101964 NA non-coding downstream 2413499 31673487 ~ 31674507 (+)
AMCG00015901 NA other upstream 672057 28577500 ~ 28580829 (+)
G101400 NA other upstream 1260872 27890552 ~ 27992014 (+)
G101275 NA other upstream 2875187 26373153 ~ 26377699 (+)
G101248 NA other upstream 2988578 26263915 ~ 26264308 (+)
G101061 NA other upstream 4387334 24865089 ~ 24865552 (+)
AMCG00015918 g3bp2,LOC106578160,LOC107714642,LOC106610282 other downstream 364057 29624045 ~ 29652938 (+)
G101752 NA other downstream 906040 30166028 ~ 30168289 (+)
G101870 NA other downstream 1544101 30804089 ~ 30809238 (+)
G101930 NA other downstream 2002473 31262461 ~ 31287766 (+)
AMCG00015959 NA other downstream 2473779 31733767 ~ 31746116 (+)

Expression


Co-expression Network