AMCG00015938


Basic Information

Item Value
gene id AMCG00015938
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 30346433 ~ 30349433 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015938
GCCGTGTTCTCTGAGCGCACCTGCCTACGTCACAGTGGTCCGCTGTTACACTGTTACGCTCAGTCTCATGAAAGCATTCGAAGAAGTTTATTGTACACTGTCCCTGTGAAGAAATGGCTTCCAGTAACAAACCATCAATAAAGCAGAGACTGCAGAAGGCGTCCTGTTGGATTCACAACAAACTCTGTAAAGTGGAAAcggtggaggaagaggaggggagacAGGATTTCCACATCCCGAGCTGGGACTCTACCAACTTGACTGACTTGTCCGACTGCCCGGCACTGCCCTCGCCCCTGGCTTTAGCCTGCCGCCGCATGTCGGTCTTCACAGCCTGGGAATCGAGGAAGCCCTGCAGGTCCGGGTGGTGGAAGGAGGCCTGGGAGCCGCAATGGGACATGCACTCCGACGGCGCCCTCTCTGACCCCTGCTCGGAAGTGCTGACCGCCCACTCTGCCTCTAGGGACTCGACGCTGGTGTCCAGCTCCTCCACAGAGACCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015938 True 503 mRNA 0.57 5 30346433 30349433

Neighbor

gene id symbol gene type direction distance location
AMCG00015937 ldb2,LOC106611552,LOC107756465,LOC107680613 coding upstream 10164 30321510 ~ 30336269 (+)
AMCG00015940 LOC106611552 coding upstream 37120 30297468 ~ 30309313 (+)
AMCG00015931 LOC102778037,LOC105903813 coding upstream 157808 30183498 ~ 30188625 (+)
AMCG00015932 NA coding upstream 163060 30177250 ~ 30183373 (+)
AMCG00015929 NA coding upstream 192111 30135535 ~ 30154322 (+)
AMCG00015941 NA coding downstream 17787 30367220 ~ 30390587 (+)
AMCG00015949 NA coding downstream 615283 30964716 ~ 30970883 (+)
AMCG00015953 NA coding downstream 855141 31204574 ~ 31216097 (+)
AMCG00015964 LOC101068172 coding downstream 1634536 31983969 ~ 31986525 (+)
AMCG00015968 NA coding downstream 1724820 32074253 ~ 32075287 (+)
G101678 NA non-coding upstream 617718 29705977 ~ 29728715 (+)
G101638 NA non-coding upstream 750542 29578529 ~ 29595891 (+)
G101560 NA non-coding upstream 1160106 29186105 ~ 29186327 (+)
G101558 NA non-coding upstream 1163564 29182531 ~ 29182869 (+)
G101556 NA non-coding upstream 1169109 29174777 ~ 29177324 (+)
G101848 NA non-coding downstream 245645 30595078 ~ 30641350 (+)
G101935 NA non-coding downstream 923739 31273172 ~ 31316692 (+)
G101964 NA non-coding downstream 1324054 31673487 ~ 31674507 (+)
G101965 NA non-coding downstream 1329279 31678712 ~ 31679106 (+)
G101966 NA non-coding downstream 1333632 31683065 ~ 31683412 (+)
G101752 NA other upstream 178144 30166028 ~ 30168289 (+)
AMCG00015918 g3bp2,LOC106578160,LOC107714642,LOC106610282 other upstream 693495 29624045 ~ 29652938 (+)
AMCG00015901 NA other upstream 1765604 28577500 ~ 28580829 (+)
G101400 NA other upstream 2354419 27890552 ~ 27992014 (+)
G101275 NA other upstream 3968734 26373153 ~ 26377699 (+)
G101870 NA other downstream 454656 30804089 ~ 30809238 (+)
G101930 NA other downstream 913028 31262461 ~ 31287766 (+)
AMCG00015959 NA other downstream 1384334 31733767 ~ 31746116 (+)
AMCG00015966 NA other downstream 1599042 31948475 ~ 31951870 (+)
AMCG00015967 NA other downstream 1644697 31994130 ~ 31996026 (+)

Expression


Co-expression Network