AMCG00015982


Basic Information

Item Value
gene id AMCG00015982
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 32470381 ~ 32475255 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015982
ATGTCAGAAGGGGAACGGGCTGCTCTGTCCCATGTCAAGttatttttctccTGGCTCCAGGCTGTTGTGTCTGATATAGATGCTGCTTCACCATATGAACGGTCACCCCCCACCTCCGCCACCGACCCCACAGTGCCAGCAGGATTCGATGAAGAAGACATCTTGGCACCATCTCTCAGGGCAGGCCACCAGCAGCCGCATGACGTGCCTGCTGAGCGCCGCGGCTCCGCCAGGCTGTGGATGCCACTGTTGAACATCAATTCGCCCCTGCGTGGCAGTGGAGCGCAGAGATACAGAAAGGATGAGGACCTCTTGGCAGGGCTGCTATATTCCTCTGCTGCTGTTAAATCCATGCTTCAGgatgtgaagaagaagaaaataatacagGTTAGTTTGAAGTCAACAGAAGAATCTTCGCTTGTTCTAAAAAAAGATGGAAGTTTACTAGTTTTGGATTGCAGCACCAATCATGGGGTCAATGAAATACAGCTCTTCCTGAGAGGAGAAGAATAACATTTCTACAAGAGCAGCACATGCTGTCTCTATACAAATACTTAGGAAAGAAAGTGAACTATTTATATCGTCAAACACGTCACCCATGGCAGCCAAAGGCCAGTGGCTCTCAGTGAGACAGTGAAGCAATTCTCAGAATCGGATTTCATTATCTAAActgaataataacaacaacaataagcaTCTGTTCTGTGCCCCTAGCACATCAAAGCCTGGGCTCACCTGCCAACGAACAATTTATGAAATTTAAAGGTTTTACTAGACCTGTTCAGACACACGCTGCTCTCAGCCACTGCAGCTGCTCCCAACTCCAGACCCCAGACCCCAACGTCGTCCGAAGCCCCTTACTGACCTTTTTAATATCAAGCATGAACTGATTATGATGGAGCAGAATGACACTGGACGTTATGACACAGACAAAGTGAATTAGATAGtattgtgtgctgtgctgtcatTGAGACACATTGCTGCGGGCCGTAGACAGCCTGCTGCGATCTCTCCACTGCCTGTTGCGCATCAGCAGCCAAtagagagaggtgggggtgcAGGTAATAAGGAGAGGCTTAACCCGGCTGGTTCTGTGCATTAGGAATTGATTGCACAGCGCTGCGGCCCGCTCATCGCTCCAGCTCAGAGTGCCATGTGACGCACAGCCTTTGGGACCGTCTGAGCGCACGGACTGAGAACTCAATTAAAAGAGAGGACGTCTATGTTGGCTGGAGAAGATTCTCTCTTGCAGCCAGCACAGCTGATCTCCTCACAGGAGAGGTGGTGGCCGGAGGATGATGAATCACACATGGTTTCCCAGCTGTCGTTGGAGTGACCAGTATCAACTATCTGTACATCACCTGCACATCTGACCCGGGTGCCCTGCAGTAAAGCCTGCTggggcagcatcatgctgtggggagcTTCTCCTCAGGATTGTGAGGACTAATGGAAAAATAGATGGAGAAAAATACaggcaaatactagaggaaCACCCGTTTCAGTCTGATAAAGACTGGAAtgaaaattcacctttcagcaggacaattaTCTAAAGGTACACTGCAGTGGCTAAAGAAtgagaaagtgaatgtcctctCACATTTCTACCCTATATTATATGTGAAAGGTTTGACCAGAGGTTTACTATAGTAAATAAGGAGGCAGTAGAGTGCATTTGAGTCCACACCTGCCCTGTCAATAACACAGTCCGTCCTGTAGGATCTCACTGATTAACTGTGTTAAATGCTCTCCACCTCGAAGAACCCAATAAAGCGGTGTCACAGCAAATAACCGAGGTGTTTAGACGCGATGACCTCAGCGGGTTGAGCAGCACTAGAAACGAGCTCCTGTGTCATCCGCTTGAAAtcctttattttacacacaagaTTACAAAACTTTACACAAGGAAAAGAGCtttacacagaaaagaaaaaaagacacagaTGAGGCCTTAGTGCTGTTAGAGGAAGACAAGAGCCCAGACCAGAAAATAATGGCGATAAACCACCAGAAGAGAAAGGACCTTGTGATGTAGCAAAGATGCCACAAACTGCGGCCGAAGTCCCCCTGATGTAATACCCCATTTCCACTAGTCAAGTTTAGCTGCACCTCACCGTGGCCGTGCAGGTCCAGGGTACGGTGTCCATATTAGGACATACTCACTCCTCAGCTCAGTTGTCACCCATCACTTGGTTTTGCTATCAGTCCTCAGTAAGTTTAGTGTTCAGCCCTCAGTTATCACTCATAGTTGATATCACCCATCGGGTGTCATTTGGCATCAAGCATCATGCTTATTGTATGTCAATTCTCATGCATCACTCGATTATAATATCAGGTATCACttgaatttaatatcaggtgtcactcaaatttaatgtcaggtatcaggtgtcactcaaaTTTAATGATAATTGCACGTAAAAGGATTCGGACCTGATATTAactgtcatactgtatatgtcatgatatagatatgtagtggctacacaggacagatttaaacccagcacactgtatttaataatgcaacgcagttcattctcccacagataaataataagggagaatatctaggatacttaaattaagctatattgtcaatgttaatcggatcgtgatacagggagaagtaacactgttatttatgatgtgctgctaaacaaaataaactagattaaattttaagtgatgtcatttgttttctatattgtttcaatgtgtcccggtttctacttttgaatatctggtataacCTATACTGtaagactgtgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015982 True 2776 mRNA 0.45 6 32470381 32475255

Neighbor

gene id symbol gene type direction distance location
AMCG00015980 gucy1a3 coding upstream 17092 32449256 ~ 32453289 (+)
AMCG00015977 NA coding upstream 155881 32303980 ~ 32314500 (+)
AMCG00015978 NA coding upstream 180501 32283439 ~ 32289880 (+)
AMCG00015969 NA coding upstream 389755 32078558 ~ 32080626 (+)
AMCG00015968 NA coding upstream 395094 32074253 ~ 32075287 (+)
AMCG00015986 NA coding downstream 1117 32476372 ~ 32492520 (+)
AMCG00015988 NA coding downstream 101615 32576870 ~ 32577223 (+)
AMCG00015993 NA coding downstream 112578 32587833 ~ 32590211 (+)
AMCG00015992 NA coding downstream 203868 32679123 ~ 32682135 (+)
AMCG00015995 NA coding downstream 222802 32698057 ~ 32702009 (+)
G102043 NA non-coding upstream 402929 32065836 ~ 32067452 (+)
G101997 NA non-coding upstream 641807 31828190 ~ 31828574 (+)
G101979 NA non-coding upstream 735427 31734174 ~ 31734954 (+)
G101970 NA non-coding upstream 753060 31716454 ~ 31717321 (+)
G101969 NA non-coding upstream 763088 31706806 ~ 31707293 (+)
G102193 fgg,LOC106602564 non-coding downstream 243835 32719090 ~ 32723878 (+)
G102202 NA non-coding downstream 307461 32782716 ~ 32791133 (+)
G102203 NA non-coding downstream 320803 32796058 ~ 32796335 (+)
G102204 NA non-coding downstream 322079 32797334 ~ 32798557 (+)
G102219 NA non-coding downstream 367935 32843190 ~ 32843498 (+)
AMCG00015981 NA other upstream 72971 32382249 ~ 32397410 (+)
G102064 gria2 other upstream 299306 32164196 ~ 32171075 (+)
AMCG00015967 NA other upstream 474355 31994130 ~ 31996026 (+)
AMCG00015966 NA other upstream 518511 31948475 ~ 31951870 (+)
AMCG00015959 NA other upstream 724265 31733767 ~ 31746116 (+)
G102201 NA other downstream 304858 32780113 ~ 32781716 (+)
G102286 NA other downstream 432244 32907499 ~ 32909553 (+)

Expression


Co-expression Network