AMCG00015986


Basic Information

Item Value
gene id AMCG00015986
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 32476372 ~ 32492520 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015986
ATGGTAGACACCAAGGGCTCACCCCAGAGGTTCCTGGATGTGGAATCTAAAACTAAGCCTTTAACCGGCGACCCTGATTTTGTCTATGAGAAGAGTACGCATCACAAGCCTGCAGACAGCCCTGCCGTGGGGGGGCAGACCAGTGCACCGGCCAAGGAGGTGCACTTTGTCTGCTATGCACTGATCAAGGACAGCTACTCAGAGGACTTCGAAGAAGATGACGACGATGATGAAGACATCCTGAAAGAGCTGCTGAACTCGAGAAAGAAAAGGAGTGAAAGAGCCAGAGCAGGGAAGAAGAAGCACAAGATCAACGACTTTGCGCTGTCTGACGACGAGGAGGAGGGCGGCGAGGAAGAGAACACCAGGCCCAAGAGGGTGTCCTTCCTGAAGACGAGGAGGAAGAGCCCCCCGGCGAGAGACGAGGGTgtggggctcggggagagggaggagaccGAGGTGAAGCACGGCCACAGAGACGCCCCGTCCCGGCAGTCTGACCGGGACGGGGCGTCCAGGGCCTCGGGACGAACCTCCCCTTGGTCGGACAGGAGCGCAGAGTCTCCGCAGAGAACGAGCCGAGAGGAGGACAAACGACCGGCCCCCCGGACCCCAGAGGCCGACCTCAGACGCACGCCCTCTGCAGACACCCAGCGTCCGACAGTTTCTCAACACGTCGCTCCATCGCTGCTCTCTCGAACAGGCAGCCCCGCGGAGGAGGGACGCCCCCGGCCCCAGCCCCGGCCCCGGCAGAGGCAGCTGCGGGGGGGCGGCAATAACCTGGAGGAGGACAGCACTGGGGGGGGAGAGACGTCTCAGAGCCGGCCCACCACCTCGTCTCTCTCGGACTCTCTGGGGAACAGGTCTCCGGGGGACTCTGCTGGCCGAGAGTGGTTCCAGCCACAGCACAGCAGGGAGGAGGCGGACGGGTCCAGGACCTGCTCTTCCACAGACCCGAGTGGATCCCCGACCCACAGGAGCCGTCCGACGCCCACAGAGCCGACCCCGTGGGGACGCAGCGCCGTCCGCCCCGCCCTGCTCCGGGGACACGGCACCGAGTCCACAGACAGATCGCGGGAGCCCGGCCCGGGGCGTGAGGTAAGCGTCCCTCTGCACTCCCCTGCGTGCGTCCCGCAGCGCAGACTCTTCCATCAGCTGTTCTTTGTTTTGAAGCAGAGAGGCACGCAGGACAAGCCGGACTGCGACGCAGAGGGACCGGGCCCTGGAGACGCGGCACTGTTCGGAACCAGgcCCGGCCCACACAGCGCCAGGACGCGCCGCCGGCCACACAGCGCCCAGTCCCGCTACCTCGGCACGCTGAGGCTCCTGGACCAGACCGCAGCCCGCGAGGAGAGCCGGCCCGAGGGGGCGGACGGCCTGCGTGCTTCCATCTACCAGGCAAGACCCGGACCGCCTCCGCTGGCTCGGGCCCAAGCGCCTGTGTTGCAGGAGTGGCTGAGAAAGAAAACGCAGCGTCTGCAGGAGACTCTGAAAACCAAGAGGCAGGAGGACAAACtgagggaggagaagaaatATAAGGACGAGCAGAACAAGAGAGAGGAGGCCAAGCTGTCCTTCGCGGCctggaaggagaagaagaaagaggtgCTCCTGGTCCGCGTGCAGGAGAAGCTGGAGGAGGTGCGGAAGCAGGAGAAGGACGTccaggagaaagaggagaggaagGAACTGGCATCCAAGGCAGTACTGAGATTGATCTTTTCCACTATAAAGAATCATAAATATgtcTTTGAGAAATGGAAGGAGGAGAAAGACGAGGTTCTGAAAGAGAAGTACCGGCAGCGGAAACAGGCGGAGCGAGGGCAGCAGAGGAAGGAGCAGCAGGAGGCAacggagaggaagagagacagcAGTTCTGCCTTCGTCAAATGGAACGAGGCGAAGACAGGCGTGATCCAGGACAAGGTGAGGAAGGAGCGACAGCAGAAGCGAGAGAGGAAGCAGAAGAAGATCCAGGCGATCCTGCAGTATGAGGCGCCGCCCCCGTGGAGCCCCCCCAATAAGACCATCCCCTTTGGGAAATAGCATGTCCTCCACCGGCCCAGTGCACTGTGGAGGGAGAGCTCTGACCGGACACGCGCTCTAATCCTGGGATCTGCGCTCAGCGTGTGCAGTGCAATGGAGTGTTTTATTGTCATATAAACATAGGCGATGCAGCGGGATGCGATTGAGGGAACTTCTCAGGTGTGTAATCAAAGtgtgacgatgatgatgatgatgatagtgatgatgatgatgaaacgCACAGCCTTGTCTCACAGGAGGGACACATCTGGACAGCTGTTTGTTCCGGCTGCCTGAAGACCGCGTTGCCCCTGTGCTGTGTGACGGGGGCTGTCCTGCCCAGCTGCCCTCGGTACCACCGGGTTCGACCGGGTCAGCAGCCTGCCTGAGGCACAGAAAGACCCGTGAGTccggtctctctcctgtcccTCACACCGGCGCCCCCGGCAGGCCCAGTCCATCCCACCCGCCTCTGGAGTCGAGGCTCTCGCTGCAGGCCCTCCAGCCGGCCGAGCGGAGGAGTGGCCCTCCCGAGGGCTCTGAAGGGGGGGTATGGAttgatgaataaaataatcaaacagtGCTGCGGGAGGAGACGGGGCCTCAGGGTCATGTGTCCACTGCGGAACTTTAATGACACGCTGCTGCAATCTCCTCTGGGGCAGTTACTCTGACGGCCTTCAGGCAGCGGGGCAGTTACTCTAAGGGCAGTGGGGCAGTGTGAACGGCATGGCCGGGCTGCAGGGCATCTGCTCTGGTCTGTGGGAACGGACAGCAAGAGTCCGACACTAGTGCAGGTTCATGAGCAGCCCTGGGAGTAAGTGACAGCTGATCTGCGCTTAAAGAATACAGACTCCAGCTCAGTGTCATCCTTGTCCTTGCAGTTGTTGTCATTGTTAAAGGCTGTAGGTGGTGAAGCTGACAATCTATTCAGGTTTTAGGAAGTGTGTGGCTTTACTGTGAAACTGCTGAACTCACAAGGTTTTAATCCCTCAAGACGTGtctatgtaaattatgtttgtggtgtttttgttttaatcacttGTCAGTAGAAAGGTATTGGCTGTatcttgtatatatttttgcataaaaGCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015986 True 3122 mRNA 0.60 12 32476372 32492520

Neighbor

gene id symbol gene type direction distance location
AMCG00015982 NA coding upstream 1117 32470381 ~ 32475255 (+)
AMCG00015980 gucy1a3 coding upstream 23083 32449256 ~ 32453289 (+)
AMCG00015977 NA coding upstream 161872 32303980 ~ 32314500 (+)
AMCG00015978 NA coding upstream 186492 32283439 ~ 32289880 (+)
AMCG00015969 NA coding upstream 395746 32078558 ~ 32080626 (+)
AMCG00015988 NA coding downstream 84350 32576870 ~ 32577223 (+)
AMCG00015993 NA coding downstream 95313 32587833 ~ 32590211 (+)
AMCG00015992 NA coding downstream 186603 32679123 ~ 32682135 (+)
AMCG00015995 NA coding downstream 205537 32698057 ~ 32702009 (+)
AMCG00015994 NA coding downstream 236688 32729208 ~ 32746535 (+)
G102043 NA non-coding upstream 408920 32065836 ~ 32067452 (+)
G101997 NA non-coding upstream 647798 31828190 ~ 31828574 (+)
G101979 NA non-coding upstream 741418 31734174 ~ 31734954 (+)
G101970 NA non-coding upstream 759051 31716454 ~ 31717321 (+)
G101969 NA non-coding upstream 769079 31706806 ~ 31707293 (+)
G102193 fgg,LOC106602564 non-coding downstream 226570 32719090 ~ 32723878 (+)
G102202 NA non-coding downstream 290196 32782716 ~ 32791133 (+)
G102203 NA non-coding downstream 303538 32796058 ~ 32796335 (+)
G102204 NA non-coding downstream 304814 32797334 ~ 32798557 (+)
G102219 NA non-coding downstream 350670 32843190 ~ 32843498 (+)
AMCG00015981 NA other upstream 78962 32382249 ~ 32397410 (+)
G102064 gria2 other upstream 305297 32164196 ~ 32171075 (+)
AMCG00015967 NA other upstream 480346 31994130 ~ 31996026 (+)
AMCG00015966 NA other upstream 524502 31948475 ~ 31951870 (+)
AMCG00015959 NA other upstream 730256 31733767 ~ 31746116 (+)
G102201 NA other downstream 287593 32780113 ~ 32781716 (+)
G102286 NA other downstream 414979 32907499 ~ 32909553 (+)

Expression


Co-expression Network