G95055


Basic Information

Item Value
gene id G95055
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 326176 ~ 326584 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU118566
TCATtgtccatcattttcattaaagtaaaaaacttgtcaattgttgtcttcggagccatctttatcatttggtttctgcatagacCTGCGTTTGCCTCTCTCATTATTTACCTACTATATGCGTTAATCGGTGGGCGGGGCTAAGCAGGTAGTAATTTAGAAGCAGGCGTTGATCTTCTTCTGCGGAGGCGGggtttagccacactattacgtaataaagtggcacattccaaatcctgtcgtttttgcagattggcttcaatataagctgtttttagaTTAACAATACAGTTTTGATttctgaaacttacaggatgtttttatagtacaattacctcttatatgtcaaaagatcaagggaattttgatttctcagttcatgacccctttaattttatttctcattggC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118566 True 409 lncRNA 0.37 1 326176 326584

Neighbor

gene id symbol gene type direction distance location
AMCG00015058 NA coding upstream 184373 140790 ~ 141803 (+)
AMCG00015067 NA coding downstream 561430 888014 ~ 894038 (+)
AMCG00015076 NA coding downstream 1160850 1487434 ~ 1489959 (+)
AMCG00015075 apex1 coding downstream 1182794 1509378 ~ 1517119 (+)
AMCG00015079 NA coding downstream 1218647 1545231 ~ 1546105 (+)
AMCG00015080 NA coding downstream 1311197 1637781 ~ 1658932 (+)
G95050 NA non-coding upstream 35654 290168 ~ 290522 (+)
G94986 NA non-coding upstream 311032 14922 ~ 15144 (+)
G95080 NA non-coding downstream 221312 547896 ~ 548130 (+)
G95081 NA non-coding downstream 234924 561508 ~ 561839 (+)
G95090 NA non-coding downstream 262555 589139 ~ 590180 (+)
G95112 NA non-coding downstream 499217 825801 ~ 826463 (+)
G95131 NA non-coding downstream 650463 977047 ~ 980025 (+)
G95078 LOC107575789 other downstream 219645 546229 ~ 546745 (+)
G95117 NA other downstream 552505 879089 ~ 938986 (+)
AMCG00015077 NA other downstream 1192074 1518658 ~ 1539558 (+)
AMCG00015081 LOC107701070 other downstream 1255610 1582194 ~ 1596895 (+)
AMCG00015092 NA other downstream 1659401 1985985 ~ 2021856 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G88822 NA non-coding CI01000015 null 3583722 ~ 3585104 (+)