G95400


Basic Information

Item Value
gene id G95400
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 1868219 ~ 1870885 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU118967
cagcgggataaagacacacagacagttgTAGGTTGTATTAAATGTTCTAGATTTTTATTGACGTCGGTTTCGTTTCTTTTTGACATGGATTCTTGTTTCTCCTTGTGCCACGCTGCCCCTCTCCCTGTGGCCAGGGGGTGTCTGTCCTCCCTGCACCCGCAAACAAATGCACAGACAACTAACAACTGCAGCATTATTCACATCAGTAGAAgtattgataataataacaacaatgtttctgttatttttttaatttatttttttacaatagccagtgttgtcattttgttcttgtttgcttCTCCTCGCAGTTATAGTGGCCCTCTGAAAACCCGGCAAAATAGATTGaaaccacagaaaaaataagatttttttttcttttcgttcATTCGTtcgttgtttgtttttctttgttgttcaataagttatttttgtcttttttcccccatgtttttgtattgttttttttttttaatttcttaatgaaACCAAAGAGAAATATTTTCCTAGAACACAGAGAGATTGATTAACGGGGCAAAGAAGGCGGAGAAGGGACAATGATTCTCACggtgcacacagacagacagacagacagacagacacttgggtggaggaggggagtgaaagagaaagaaatagaGAGGGTGGAGGGTGCTTTGTCATGTCTAAATGGAGGGAGCAGCTTTCATATGCCCACCCcaagaataattaataaatacatttaaacatatttctctCCCCCAGGTAAAACAGAGCGAGTCAGTAAGAATGGGGACAGAGGACTGTGTGCCCCCTCTCATCTCAACCAGCAGCAAAACAAGGTTTCGCAGAACTGGGGAGGATGGGGGATGCCATTGTGGGCTCCCCTGCCACTGGGActgagggggaggagagggagggagcaggaGATGAacggagggagagggagagtcgagcagggagggaaggagggaagaggagaggaCAGTCTGAGGAGAGTCACAGTAAGTGGTCACTCGTCGCTCGGCCACTAGATGGCCTCCATTCGCCGCTCAGCTCCGActgcccccccctctctctcaccctcggAAACTGCCAGTCTTCGCTCTCTCGGCTTCATGTTCCTGCAGAGAAGGTATGAGTGATGTCTTTCCAGGCCGCTCCAACACCATGATTGCGTTCAGAGGGGGGAGGGTCGGATACCAGCCCCTGCTATTTCTGACTGACAAAGATGTTGTCTGAGAGGCTGAGAGAGGGACGGGTGCACAGCTCTCCTGTAAGGAGTCTGCTACTTGTCACTTTCTCTCTCGCCTCTTATCCTCTCTTTGTCAGAGCGGGATGGAGGGAGGAGCAGATTAGGGGGAGGTTGTTGCCATGTGCTcgtttgtttccattttttgctttttctctgGAGGGGGGAGGCAGATGGGGCGGGGGGGTGCTTGTGTGTTAAGAGGGATGAAGTGAAGTGAGTGAAACAAAAATGAGAATggggagatagagagatagatagatagagggagggagggagagggtggcGCTGGATTGGAGGCAGGGTGGATGAGTTGAAAATTGTTTGATAATTTAATAGTAGGTCTCCTTTTCCACCCaacctacagagagagagagagaaag

Function

GO: NA

KEGG:

id description
ko00010 Glycolysis / Gluconeogenesis
ko00710 Carbon fixation in photosynthetic organisms

RNA

RNA id representative length rna type GC content exon number start site end site
TU118967 True 1614 lncRNA 0.47 2 1868219 1870885

Neighbor

gene id symbol gene type direction distance location
AMCG00015078 osgep,LOC102796710 coding downstream 359697 1502438 ~ 1508522 (-)
AMCG00015072 NA coding downstream 394963 1460842 ~ 1473256 (-)
AMCG00015073 NA coding downstream 436464 1424754 ~ 1431755 (-)
AMCG00015071 panx2 coding downstream 473797 1382767 ~ 1394422 (-)
AMCG00015074 etfb,LOC107568878 coding downstream 505460 1347056 ~ 1362759 (-)
AMCG00015088 NA coding upstream 5025 1875910 ~ 1881701 (-)
AMCG00015093 grik5 coding upstream 159414 2030299 ~ 2051767 (-)
AMCG00015097 NA coding upstream 232875 2103760 ~ 2110678 (-)
AMCG00015104 NA coding upstream 380705 2251590 ~ 2263117 (-)
AMCG00015110 NA coding upstream 522111 2392996 ~ 2393305 (-)
G95335 NA non-coding downstream 70186 1797825 ~ 1798033 (-)
G95333 NA non-coding downstream 98235 1765233 ~ 1769984 (-)
G95289 NA non-coding downstream 256390 1611102 ~ 1611829 (-)
G95269 NA non-coding downstream 328334 1539623 ~ 1539885 (-)
G95223 NA non-coding downstream 462860 1402345 ~ 1405359 (-)
G95437 NA non-coding upstream 150895 2021780 ~ 2024601 (-)
G95447 NA non-coding upstream 190327 2061212 ~ 2063604 (-)
G95469 NA non-coding upstream 257926 2128811 ~ 2130245 (-)
G95508 NA non-coding upstream 382552 2253437 ~ 2253730 (-)
G95511 NA non-coding upstream 392238 2263123 ~ 2263470 (-)
G95257 apex1,LOC107658891,LOC107579619,LOC107725930,LOC107656416 other downstream 351094 1510521 ~ 1517125 (-)
AMCG00015070 lim2,LOC102215845,LOC100699404 other downstream 541065 1311339 ~ 1327154 (-)
G95165 NA other downstream 747213 1060260 ~ 1121006 (-)
AMCG00015091 erf other upstream 92126 1963011 ~ 1979876 (-)
AMCG00015094 NA other upstream 195789 2066674 ~ 2077367 (-)
AMCG00015098 gsk3a,gsk3ab,LOC106576382,LOC107551697,LOC107724158,LOC104943961 other upstream 209886 2080771 ~ 2093238 (-)
G95472 NA other upstream 265535 2136420 ~ 2137452 (-)
AMCG00015099 NA other upstream 269456 2140341 ~ 2201333 (-)

Expression


Co-expression Network