G95447


Basic Information

Item Value
gene id G95447
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2061212 ~ 2063604 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119023
AACATCTCTCTGCGCCTCTGACAGACAGTAAGCCCAGCGCTGCAGAAATCAACCTGCCCCTTCAGAACAAGCAGCCTCAAccacaatacaaataacagcagcaataatCACACTAACAACAATTACCCTCacagtaatagtaataacaataataataataatagtagtatcAGTGCTGCCGGCGAAGCAGTGCGTGTCAGAATGGCATCTGATCGGAGTCAGCACTGGTTTCTGTTTTCAGGATAGACATTTTCTGCGATGGTGCCATTGGTGCCTCCAGCTCGGCTCCTAGCTACACTCTCCTCTCCACATTCCCAACGCCGTGGGAGATGGGATCAGAGATTCCTGGGAATGTCAGGATAGACGCTCGGATAGTGCGGCCCACCATCCTGCCCGGAATATTACTCCAGacgggatagagagagagagagagagagagaggctgtggAGTCAGTGGCTGTTGATCGCTGCACGAGTTTTCCAATCCAGAATCACGATCCAGCAGGAATTTAGGATTGGATTTTCCTGTGGGGAAAAGAGGACAAAGCCAAGCCAAGCGTGGCATGGGAATTGGGAACGTCTCTTCTGGGAGGATACACTGTCCCTGGTGTTTCTACTGGATTTGGAGACACAaaggagacagagacacagaggagacacagagagacacacagagagagaagaggaagtCGCTCACTAGccaccttctccttcttctttttcaacggtttttgatttcttccacTTGATTTATCACTCTCTATCTTATCAGTCTACtcatttatctatctatctatctgtctgttagtctgatttttattttcatttttactcaTAAAGGATTTTTTCCCCGGACGACCTCAGATCAGCTGCCGTGATCTTTCCCGATAttggggatttttttgttttccggGAAAGATCGAaacggagagaaagagagcaggagagagcgagagaaacagagagagaggggtggggaaAAGAGATAtaagatacacacatacacagacacaaatacacCCCCCCAGTCTCTCCTGCCTTTCCAGGAACAAGGGATCTGAAAATCATATTAAGAGGACAATTagtaaattaactaaatatacagagagaaagaggtcGCAACCTCTTACTGCTCAGAACACGGTGGTCCCTGTGGTGACTGGACTGTCCTACAAGACCCTACagtgagaaagacagagagcagGGGCAGGACTGTGGGGACCTGAGAGAGggaagacagagggagagaggaggacaggAGGAGAGAAGGGCAGAGAGGAGACAGCGTgcaagagagatagagagagaaaaggacaCAGAGAGCACCAGGGAAGTAGAGGAAGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119023 True 1347 lncRNA 0.47 2 2061212 2063604

Neighbor

gene id symbol gene type direction distance location
AMCG00015093 grik5 coding downstream 9445 2030299 ~ 2051767 (-)
AMCG00015088 NA coding downstream 179511 1875910 ~ 1881701 (-)
AMCG00015078 osgep,LOC102796710 coding downstream 552690 1502438 ~ 1508522 (-)
AMCG00015072 NA coding downstream 587956 1460842 ~ 1473256 (-)
AMCG00015073 NA coding downstream 629457 1424754 ~ 1431755 (-)
AMCG00015097 NA coding upstream 40156 2103760 ~ 2110678 (-)
AMCG00015104 NA coding upstream 187986 2251590 ~ 2263117 (-)
AMCG00015110 NA coding upstream 329392 2392996 ~ 2393305 (-)
AMCG00015109 NA coding upstream 363342 2426946 ~ 2432937 (-)
AMCG00015106 NA coding upstream 374705 2438309 ~ 2438755 (-)
G95437 NA non-coding downstream 36611 2021780 ~ 2024601 (-)
G95400 NA non-coding downstream 190327 1868219 ~ 1870885 (-)
G95335 NA non-coding downstream 263179 1797825 ~ 1798033 (-)
G95333 NA non-coding downstream 291228 1765233 ~ 1769984 (-)
G95289 NA non-coding downstream 449383 1611102 ~ 1611829 (-)
G95469 NA non-coding upstream 65207 2128811 ~ 2130245 (-)
G95508 NA non-coding upstream 189833 2253437 ~ 2253730 (-)
G95511 NA non-coding upstream 199519 2263123 ~ 2263470 (-)
G95544 NA non-coding upstream 327965 2391569 ~ 2391872 (-)
G95605 NA non-coding upstream 569376 2632980 ~ 2633218 (-)
AMCG00015091 erf other downstream 81336 1963011 ~ 1979876 (-)
G95257 apex1,LOC107658891,LOC107579619,LOC107725930,LOC107656416 other downstream 544087 1510521 ~ 1517125 (-)
AMCG00015070 lim2,LOC102215845,LOC100699404 other downstream 734058 1311339 ~ 1327154 (-)
G95165 NA other downstream 940206 1060260 ~ 1121006 (-)
AMCG00015094 NA other upstream 3070 2066674 ~ 2077367 (-)
AMCG00015098 gsk3a,gsk3ab,LOC106576382,LOC107551697,LOC107724158,LOC104943961 other upstream 17167 2080771 ~ 2093238 (-)
G95472 NA other upstream 72816 2136420 ~ 2137452 (-)
AMCG00015099 NA other upstream 76737 2140341 ~ 2201333 (-)
G95536 NA other upstream 287056 2350660 ~ 2351050 (-)

Expression


Co-expression Network