G95612



Basic Information


Item Value
gene id G95612
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2648459 ~ 2649573 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU119226
GGGGACCGGCAGTGTGTTGTCAGTACGCTGCTCTTTTAAATGATCCCACCTGGATCTAGGCATGAATTAGCGTTTTTTGACACAGCTGCAGTCGTCACAGTTTCTGCTTACTATGCAGAAAACCTTAGGTGCAGTATTTCTTCCTACATAAACTTGTAGTTTCTTAGCCATGGTTGCATGTTCTGttaatcaaagaaaacaatagttAAGGGGGTTGTAGGTGGTGTTTTACatatgtgaatatttgtaattgtagaACCTGTATCAGGTCAGAGCTAATAGTCACTTTGAGCAAAGGTGCATTTCTGTCCATTGGACACCAACATTGGCAGACTCTGGGTGAAATGCATTGGTAGCCGTCTTCAAATGGCAAGATGGTGCTCACCCCTGTTCAGCGAGGTGAGCCCACTCTCCCTACCAGTCCTCCCTGTCCCCTCACACTGCGATGGCATTCTCCTGGCCCTGATCTTCTCCACCACTGCCTAGTTGTCACTTGCTCAGCGTTGGGGGTGCGTGGTTTAGACCAGGTGAGGTTGCTGTGATTGAAGGGGGAGTTCCTAGGGGATTCAGGAGTGCTCATCCTGATGAATAAGTTTATGAATATTGGTTGCATTCATGTAGTGCAGATTTCCAcggttctgtgcagatctgtgcagaactgtcaAACTGCTATATGAACATGACCATTGCTAATGCCTTTGAGCTCAGGGCTGCACAGTGGATTAAAACATTGGGAAGGGGAAGGTGGGACGTAGTCGGACAttcctcacccccccccccaggaggACTGACTGAGGAACATTATGAAATAGTTGGCTTGGGTCACACAGTTTGACGACTGGCCTTTCCTTTATCTCGGAACACCACTATTTTTAAGTACTGTTGTAAAAATCAAAattgtcaaatgttttaattgtgtgtatgtgtaataaatgtatagtgtgtgtgtgtgtatctgtatacaTCAATATAATTTTGGAcctaatgaaatacaaatataaaaaaacaaaacctgtatacgagaaaaaaaaactgtgcctGGCCAATttgtaaagtgtatttaaaaaataaaccaataaactgttactgtgtgtgggctgtttcttttctttctc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU119226 True 1115 lncRNA 0.43 1 2648459 2649573

Neighbor


gene id symbol gene type direction distance location
AMCG00015119 NA coding downstream 7210 2639239 ~ 2641249 (-)
AMCG00015118 NA coding downstream 11038 2628687 ~ 2637421 (-)
AMCG00015112 NA coding downstream 67478 2578074 ~ 2580981 (-)
AMCG00015114 NA coding downstream 115888 2528675 ~ 2532571 (-)
AMCG00015113 NA coding downstream 158679 2487161 ~ 2489780 (-)
AMCG00015125 LOC103478466 coding upstream 26208 2675781 ~ 2685577 (-)
AMCG00015124 NA coding upstream 36186 2685759 ~ 2693630 (-)
AMCG00015126 NA coding upstream 48687 2698260 ~ 2712770 (-)
AMCG00015123 LOC108273518,LOC103477911 coding upstream 69023 2718596 ~ 2720790 (-)
AMCG00015122 NA coding upstream 83213 2732786 ~ 2735205 (-)
G95605 NA non-coding downstream 15241 2632980 ~ 2633218 (-)
G95544 NA non-coding downstream 256587 2391569 ~ 2391872 (-)
G95511 NA non-coding downstream 384989 2263123 ~ 2263470 (-)
G95508 NA non-coding downstream 394729 2253437 ~ 2253730 (-)
G95469 NA non-coding downstream 518214 2128811 ~ 2130245 (-)
G95636 NA non-coding upstream 26866 2676439 ~ 2676679 (-)
G95637 NA non-coding upstream 27351 2676924 ~ 2677129 (-)
G95653 NA non-coding upstream 47679 2697252 ~ 2697823 (-)
G95675 NA non-coding upstream 92745 2742318 ~ 2742602 (-)
G95780 NA non-coding upstream 286721 2936294 ~ 2939095 (-)
G95536 NA other downstream 297409 2350660 ~ 2351050 (-)
AMCG00015099 NA other downstream 447126 2140341 ~ 2201333 (-)
G95472 NA other downstream 511007 2136420 ~ 2137452 (-)
AMCG00015098 gsk3a,gsk3ab,LOC106576382,LOC107551697,LOC107724158,LOC104943961 other downstream 555221 2080771 ~ 2093238 (-)
AMCG00015094 NA other downstream 571092 2066674 ~ 2077367 (-)
AMCG00015117 NA other upstream 11354 2660927 ~ 2670244 (-)
G95700 NA other upstream 164074 2813647 ~ 2816067 (-)
AMCG00015140 NA other upstream 224534 2874107 ~ 2878992 (-)
AMCG00015135 NA other upstream 238011 2887584 ~ 2891696 (-)
G95791 NA other upstream 328624 2978197 ~ 2980408 (-)

Expression



Co-expression Network