G95791


Basic Information

Item Value
gene id G95791
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2978197 ~ 2980408 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119447
CCCAAATGTATACAGAGGATATTTCATGGCAAAAATTaaccagctgaaataaaaatagaaataaaggtGCAATTAAAGGAATCTCAGGACATTTATTGACCACATGGTAGGTGACTAGACTCCAAACCAGTCCCActctcaaataaaaaaacaaaaactgaaactgaaaagctATCAAATAAAGGGAGCATCAATTactaaatgacaataaaaaccCAACTATAAATGTATCTCCCAGTCCAGCATGGTCTCCAGCCCTGTTTCTGGAGAGAGATAGTACACACAGAAGGATAGCAATACACctacaaataaatgcagtaGGCACACACACTCCAAATGCCAAATGTAATTGTAGATTTTTtaagtggagagagagacagacagacaagcagaGGGAAGGAGAACTTCCACTGAAATGACCAGTAATACTTGCTTCACTGTAATGATGTTGCAGTTAGTAACTCAGCACTCAATATTGTAATGCCTCTCTCACCACAACGATAGgctatatataaatgaatacatttataaaagggACACAGGAATAAATCATACAGATACTACATTTAATTTCTCCACACTCACATTCTGAGTTTAAAACACCcaaactttaatttcagaggCCCGGCCCAGCAGAAACACTCCATCCCCAGGTCCTGTCCTCTCGTGGCTCTGCCTCCCTGGGCAGCTGCTACCTTGTGTAACGGAGCAGTCCAGTGACAGAAGCCAAGTATAANNNNNNNNNNtttttatatatatatatatatatatatatatatagttttgaaaaCACTGCAGCTGGTGCAGACAAAGGAGTGTCGGTGTAGGCCATAAATTGCCTCCTCCTTCTGTGTTGATACAGTGCATCTCCTTCTGTTTTGTAGCTTtgagggggggttggggggggtgtcCGCCACCGTTGATCAAAACAGTTCTTCTCCAATAAGAAATTAAGGTCCAGTTGGAAAAATTCTCTCGACCCCAAGTGAGAATCTGCCCCTCTCCATGCCCTCCTTGGCCCCCATTGGGATAATCTCACACCCAGCTATCTTCCACCTCTGTCAGAGAATCCACCCACTCACTCCAGTGGTTGCTGAAATCGGTGCAGTTCATAGTGGGGAACTTCTgttacccccacccccaactctCTGCCTGGAAAAATGTACAGTTGCACCACTTTACAGACTAGATGACACTATGACCTCCAAAAAACAGTTTAGTCAAAATGAGAAACATCTTTTACAATCCTTCTTAATCCATCTTTGCCATCAAGTTCactggtgttgtgtgtgtgtgtgtgtgtgtgtgtcagtgtgactgACTGTGTGTACATGTCAGTGTCCAGTGTGCATCTCCTGCTCCACCCCCTTGCTTTCGCTCAGTCCCTCACtcccacacactctcacactgctCCTATTTAAGCTCCAGCTTTGGGGATATCTGGCAGCCTCTGTGGCATTCTGTCTCCCCCTCCCTAGTCTCCTTTCTCTTCACCTCCCACGCTTTGTCTctctacctcCAACCATCTGGCCTCCCCACTCACCCCTACCCTCTGCTCCTCCCTCTGGCACTCCTCAGCAGCTTTGGCTCTAGCGATGCAACCCCTCTTATAGGTCCTCAGTTTGCGAGGCTCCTGGGCACCACAACCATCTTCCCCAGCAGaggggtgatgggggggcaccAACTTGCCTCCAGCCGCACTCTCCCCCTGTCCTCCTCGCTGGTGGCTCATCCTACTCACACATGGTGGGCTGCCCAAGCTGGATCTGCCTTCTCTGACATGCTCAGTCTCCATTTCAACCtcttctcttcccctctcttcctcctgctccctgGCCCCTCCTTCTTTTTCTACTTCACTGCCTCCCCATGCCCCGTCTCTCCTTCCTCCCCACTCTACTCCCacctcttctcttttttcctctaCTGCCCACTCCTCCTCTTCACTCCATCCCCATCGCCCATCTCCCTTCTTCACCCTTGCTTCCTCCTCTCCATCCCTTGCATCATGTCCCCCTCCCTTCCACATCACTGCTCCCTCTATGCCtccctcctcctgcctctccaccTTCACTATGCCCTCCATGCCtccctcctcctgcctctctaTCTTCACTgccctctccatccctccctgcTCCTGCCTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119447 True 2150 TUCP 0.48 2 2978197 2980408

Neighbor

gene id symbol gene type direction distance location
AMCG00015136 NA coding downstream 49920 2925485 ~ 2928277 (-)
AMCG00015139 NA coding downstream 55685 2915988 ~ 2922512 (-)
AMCG00015138 NA coding downstream 67783 2905065 ~ 2910414 (-)
AMCG00015137 NA coding downstream 74565 2893323 ~ 2903632 (-)
AMCG00015129 NA coding downstream 133684 2836730 ~ 2844513 (-)
AMCG00015144 NA coding upstream 20408 3000816 ~ 3008611 (-)
AMCG00015154 NA coding upstream 255097 3235505 ~ 3239525 (-)
AMCG00015153 LOC103393952,LOC100707815,LOC108229619,LOC101472794,LOC105916922,LOC105910646,LOC103360126 coding upstream 261702 3242110 ~ 3247588 (-)
AMCG00015152 NA coding upstream 270573 3250981 ~ 3268761 (-)
AMCG00015158 NA coding upstream 323349 3303757 ~ 3313326 (-)
G95786 NA non-coding downstream 14852 2960335 ~ 2963345 (-)
G95778 NA non-coding downstream 32345 2943087 ~ 2945852 (-)
G95780 NA non-coding downstream 39102 2936294 ~ 2939095 (-)
G95675 NA non-coding downstream 235595 2742318 ~ 2742602 (-)
G95653 NA non-coding downstream 280374 2697252 ~ 2697823 (-)
G95798 NA non-coding upstream 13266 2993674 ~ 2994155 (-)
G95814 NA non-coding upstream 145023 3125431 ~ 3127592 (-)
G95933 NA non-coding upstream 491799 3472207 ~ 3472926 (-)
G95960 NA non-coding upstream 622196 3602604 ~ 3603677 (-)
G95957 LOC100846954 non-coding upstream 637365 3617773 ~ 3618298 (-)
AMCG00015135 NA other downstream 86501 2887584 ~ 2891696 (-)
AMCG00015140 NA other downstream 99205 2874107 ~ 2878992 (-)
G95700 NA other downstream 162130 2813647 ~ 2816067 (-)
AMCG00015117 NA other downstream 307953 2660927 ~ 2670244 (-)
G95536 NA other downstream 627147 2350660 ~ 2351050 (-)
G95850 lipe other upstream 205761 3186169 ~ 3189093 (-)
G95854 NA other upstream 216013 3196421 ~ 3197189 (-)
G95921 NA other upstream 369471 3349879 ~ 3350442 (-)
AMCG00015164 NA other upstream 623275 3603683 ~ 3607192 (-)
AMCG00015180 NA other upstream 1129911 4110319 ~ 4123963 (-)

Expression


Co-expression Network