G95892


Basic Information

Item Value
gene id G95892
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3399070 ~ 3466541 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119581
cggacagacacacaggcggACAGGGACAAtgatacagacacacaggcgGACAGGGGTACCGTCCGTGTGGAGACAGTTCAGCAGCCCCAACAGCGGCAACAGCGTCACAGACTTCATGGTGAAACCCCTTCTCTGATCTTCCGTGTCTCCGTCTGTCCCGCTCGGCGCCTCTGTCCCGCTGTCACTGTCTCAGTCTgcccctgtctctgtctctctctctctgtcagtgtcagtctgtctgtctgcctgtccttCGCgatctctgtccctgtctcagTTTGTCTCACTCTccgtgtccctctgtctctgtgtcgcACTTTTCTGTGTCTCCGTCCGTCCCGCT
>TU119583
cggacagacacacaggcggACAGGGACAAtgatacagacacacaggcgGACAGGGGTACCGTCCGTGTGGAGACAGTTCAGCAGCCCCAACAGCGGCAACAGCGTCACAGACTTCATGGTGAAACCCCTTCTCTGATCTTCCGTGTCTCCGTCTGTCCCGCTCGGCGCCTCTGTCCCGCTGTCACTGTCTCAGTCTgcccctgtctctgtctctctctctctgtcagtgtcagtctgtctgtctgcctgtccttCGCgatctctgtccctgtctcagTTTGTCTCACTCTccgtgtccctctgtctctgtgtcgcACTTTTCTGTGTCTCCGTGTCGCACTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119581 True 343 lncRNA 0.58 2 3399070 3437323
TU119583 False 342 lncRNA 0.58 2 3399070 3466541

Neighbor

gene id symbol gene type direction distance location
AMCG00015155 NA coding upstream 103355 3284282 ~ 3295715 (+)
AMCG00015150 LOC105418962 coding upstream 197967 3189566 ~ 3201103 (+)
AMCG00015151 NA coding upstream 212530 3184731 ~ 3186540 (+)
AMCG00015149 NA coding upstream 215879 3173919 ~ 3183191 (+)
AMCG00015148 NA coding upstream 225614 3170182 ~ 3173456 (+)
AMCG00015162 NA coding downstream 87703 3554244 ~ 3555842 (+)
AMCG00015166 NA coding downstream 172821 3639362 ~ 3663412 (+)
AMCG00015165 NA coding downstream 260372 3726913 ~ 3731964 (+)
AMCG00015167 NA coding downstream 287523 3754064 ~ 3756872 (+)
AMCG00015168 NA coding downstream 327925 3794466 ~ 3822463 (+)
G95890 NA non-coding upstream 3656 3393942 ~ 3395414 (+)
G95882 NA non-coding upstream 51995 3344376 ~ 3347075 (+)
G95878 NA non-coding upstream 73500 3311918 ~ 3325570 (+)
G95874 NA non-coding upstream 94748 3302675 ~ 3304322 (+)
G95839 NA non-coding upstream 148546 3250316 ~ 3250524 (+)
G95932 NA non-coding downstream 5754 3472295 ~ 3472720 (+)
G95944 NA non-coding downstream 71591 3538132 ~ 3538336 (+)
G95950 NA non-coding downstream 134588 3601129 ~ 3601385 (+)
G95964 NA non-coding downstream 204848 3671389 ~ 3671670 (+)
G95972 LOC103376870 non-coding downstream 344024 3810565 ~ 3811060 (+)
AMCG00015142 NA other upstream 427725 2965301 ~ 2971345 (+)
G95704 NA other upstream 568449 2820467 ~ 2830621 (+)
G95693 NA other upstream 590575 2806811 ~ 2808495 (+)
G95624 NA other upstream 732944 2664504 ~ 2666126 (+)
G95618 NA other upstream 740319 2657485 ~ 2658751 (+)
G95955 NA other downstream 175399 3641940 ~ 3642200 (+)
AMCG00015170 NA other downstream 437158 3903699 ~ 3916734 (+)
AMCG00015173 NA other downstream 467375 3933916 ~ 3949420 (+)
G95992 NA other downstream 503288 3969829 ~ 3971683 (+)
G96030 NA other downstream 622660 4089201 ~ 4100140 (+)

Expression


Co-expression Network