G95960


Basic Information

Item Value
gene id G95960
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3602604 ~ 3603677 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119672
agagagggacagggggaAGAGGGGGGAGTaacagggagaggaggaggaggagaaggagtgAGATGGAGAAGAAGAGAGTAAAGGAAAGAAGGACACAGACTGAGGAACCTCTCACTCAAGCTTTATTAGCAGGGCTAAGTGACATCAGTGTTTCCAGAGCATTGAGACAGGTCCAGAACTCAGGAACAGGAGTAAGGGGGAACAGAAAGCATATTGACTCTCTTTCTGTTTGAACACCAGTTTGTCTCCAGGAtgcccctctctctttctctctctctctctggggagTAAGAAAAAAGAACTGAGAAAAGCAACCAGATTgtggtcttgtttttttttcttgttttttttacattctgccatatttgtattttatttttagaaatccaaagacaaacaaaaaaacaaaaaaaacaatcagataCTACTGATCAAtactttatttccatttcattgaAAGGGTTTCAAATTGGGATTGATGtctgtgattttattgtatacatCTTTTTTATGTGATTCAGAACCAACCATTCTGGAGTGTAAGTTTTTTTGGAAGTCTGAAACTAAGTCACAAGACCTACTTCTGCAATTGTGCATAGCAATGCATTTTTTGACCACAAGTCTTGCTCAACCTGTGCCCCCCAACCCCGTACTAAATACTGTCTGTGTCGCTCTCGGGAAATCTGAAAATTGCACCTTGCTAGATTGCACTACTGCACCCTCAGAAACAATGTCTAGTGTGCTGAGAAATGAAATAAGTTACTGATTTTGTaaataagtgtttgttttttaatctgtaactaataaaattattatgtaatttacCTTGTTTTTAACAGTCCCTTAGGGTTCAATATAatattggtgtgtgtgtcattgttattaattaaatgcaggTATAAAATGCAGGTATGAAATCCTTAGGATCCCAATATGCCCATTATAGCacaaatgtatgaaattaattaatttttaaatgaattaagatATCATTAAGATATCAGACTGAGACACAATGCTCGCCTTACATACCTAGATGGcttattggtttaaaaaaaaataaagttcagttCT

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04210 Apoptosis
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU119672 True 1074 lncRNA 0.36 1 3602604 3603677

Neighbor

gene id symbol gene type direction distance location
AMCG00015163 megf8,LOC104957441,LOC106633547,LOC102782412,LOC106605571 coding downstream 137793 3416852 ~ 3464811 (-)
AMCG00015161 NA coding downstream 188402 3408589 ~ 3414202 (-)
AMCG00015159 NA coding downstream 195063 3403474 ~ 3407541 (-)
AMCG00015160 NA coding downstream 204452 3394887 ~ 3398152 (-)
AMCG00015156 NA coding downstream 243699 3351618 ~ 3358905 (-)
AMCG00015169 NA coding upstream 212269 3815946 ~ 3825037 (-)
AMCG00015175 NA coding upstream 299151 3902828 ~ 3904532 (-)
AMCG00015174 NA coding upstream 346467 3950144 ~ 3968980 (-)
AMCG00015182 NA coding upstream 421977 4025654 ~ 4027415 (-)
AMCG00015178 NA coding upstream 433741 4037418 ~ 4039216 (-)
G95933 NA non-coding downstream 129678 3472207 ~ 3472926 (-)
G95814 NA non-coding downstream 475012 3125431 ~ 3127592 (-)
G95798 NA non-coding downstream 608449 2993674 ~ 2994155 (-)
G95786 NA non-coding downstream 639259 2960335 ~ 2963345 (-)
G95778 NA non-coding downstream 656752 2943087 ~ 2945852 (-)
G95957 LOC100846954 non-coding upstream 14096 3617773 ~ 3618298 (-)
G95968 NA non-coding upstream 126322 3729999 ~ 3730319 (-)
G95978 NA non-coding upstream 267399 3871076 ~ 3871334 (-)
G96009 NA non-coding upstream 298135 3901812 ~ 4037171 (-)
G96010 NA non-coding upstream 300020 3903697 ~ 4039218 (-)
G95921 NA other downstream 252162 3349879 ~ 3350442 (-)
G95854 NA other downstream 405415 3196421 ~ 3197189 (-)
G95850 lipe other downstream 413511 3186169 ~ 3189093 (-)
G95791 NA other downstream 622196 2978197 ~ 2980408 (-)
AMCG00015135 NA other downstream 710908 2887584 ~ 2891696 (-)
AMCG00015164 NA other upstream 6 3603683 ~ 3607192 (-)
AMCG00015180 NA other upstream 506642 4110319 ~ 4123963 (-)
G96094 NA other upstream 571202 4174879 ~ 4180441 (-)
G96191 NA other upstream 1014034 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 1174716 4778393 ~ 4802904 (-)

Expression


Co-expression Network