G96030


Basic Information

Item Value
gene id G96030
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4089201 ~ 4100140 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119757
cagtggttggccaaggaaacttactgcagcagatgaaagacacttcatgcttacttcccttcacaatcagaagatgtccagcagtgccatcagctcagaattggcagaaaacagtgggaccctggtacaccNNNNNNtgtctggagaagtctggtcagaagtggccttcatggaagacttgcagccaaaaacccatacctctgacatggcaacaaggccaagcgactgaactatacacaaaaacacaggaactggggtgcagaaaaatggcagtaagtgctctggactgatgagtcaaaatttgaaatatttagctgtagcagaaggcagtttgttcgctaaagggctggagagtggtacacaaATGAATGTCTGCAGATGCATGGtagaggttccttgcaagtttggggctgcatttctgcaaatggagttggggatttggtcagaattaatggtctgctcaatgctgagaagtacaggcagatacttattgTCATGTTTCCCAAGCCCtgaccctctatccccactagaggccaccacTGTTCCcctgtcttttctttctcttctcactGCTTTCATCTGTCAATCATCCCTTTAACATTCTTCTACcccatgtgcactcttgttctctccctctgttcccatCGGCCCTGCACCTCCAATCCTGGTTTCTGACTCGGGGCGAAGTGTTGTCAGTCCCACCTGTTTCACTAAGCcttgctccttgtgctccttccCCGAACCGCCTTCTGGATCCTGAcctttgcctgtgacctcgaccatgtctttgccttgcccttaTCAGCCACCTCAAgtactgcacttgggtcccctagTTCCCATGCCCTGCGGTCCCTGAGACCGTGacacttatccatcatgcaatactatcagggaggcatctgattggccccaaatttattctgcagcatgataacaaccccaaacatacagtgacagtcattaagaactatcttcagcataaagaagaacaaggagtcctggaagtgatggtatggcccccacagagccctgatctcaacatcatccagtctgtctgggattacatgaagagagagaagctgcCTAAATCTACAGAaggatgtttgggccaacctaccttccaagttccttcaaaaagtgcaagtgtacctagaagaattgatgctgttttgaaggcattATGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119757 True 1188 TUCP 0.48 2 4089201 4100140

Neighbor

gene id symbol gene type direction distance location
AMCG00015172 NA coding upstream 186863 3894791 ~ 3902338 (+)
AMCG00015171 NA coding upstream 200284 3884470 ~ 3888917 (+)
AMCG00015168 NA coding upstream 266738 3794466 ~ 3822463 (+)
AMCG00015167 NA coding upstream 332329 3754064 ~ 3756872 (+)
AMCG00015165 NA coding upstream 357237 3726913 ~ 3731964 (+)
AMCG00015185 NA coding downstream 88327 4188467 ~ 4196925 (+)
AMCG00015183 hsc70,LOC108441346,LOC103045816,LOC108241987,LOC107675864,LOC107745199 coding downstream 98346 4198486 ~ 4213829 (+)
AMCG00015184 NA coding downstream 115604 4215744 ~ 4218912 (+)
AMCG00015190 NA coding downstream 201495 4301635 ~ 4304037 (+)
AMCG00015189 NA coding downstream 205748 4305888 ~ 4363707 (+)
G95977 NA non-coding upstream 217867 3871078 ~ 3871334 (+)
G95972 LOC103376870 non-coding upstream 278141 3810565 ~ 3811060 (+)
G95964 NA non-coding upstream 417531 3671389 ~ 3671670 (+)
G95950 NA non-coding upstream 487816 3601129 ~ 3601385 (+)
G95944 NA non-coding upstream 550865 3538132 ~ 3538336 (+)
G96059 NA non-coding downstream 134531 4234671 ~ 4283832 (+)
G96061 NA non-coding downstream 144247 4244387 ~ 4299500 (+)
G96063 NA non-coding downstream 151523 4251663 ~ 4255472 (+)
G96060 NA non-coding downstream 192919 4293059 ~ 4296312 (+)
G96072 NA non-coding downstream 199766 4299906 ~ 4300232 (+)
G95992 NA other upstream 117518 3969829 ~ 3971683 (+)
AMCG00015173 NA other upstream 139781 3933916 ~ 3949420 (+)
AMCG00015170 NA other upstream 172467 3903699 ~ 3916734 (+)
G95955 NA other upstream 447001 3641940 ~ 3642200 (+)
AMCG00015142 NA other upstream 1117856 2965301 ~ 2971345 (+)
AMCG00015197 NA other downstream 483557 4583697 ~ 4667058 (+)
G96264 NA other downstream 775981 4876121 ~ 4879896 (+)
G96317 LOC100846954,LOC107575789 other downstream 921226 5021366 ~ 5022052 (+)
AMCG00015212 NA other downstream 967907 5068047 ~ 5077903 (+)
AMCG00015215 NA other downstream 984434 5084574 ~ 5119401 (+)

Expression


Co-expression Network