G96063


Basic Information

Item Value
gene id G96063
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4251663 ~ 4255472 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119800
TGCCCTTCTGTCTACCAGAATAATCTAATcacagttattaatttattaatttgaagatGCATTAAAAGTGAAGGAGTTCAGAAATATAGCCATGTTGTGAAACCCTCAGTAAACATTGTGTCCAGGCACAAAACACTGAACCAAACAACACAGAGTTCCAGACtttattagaaaatattttttaaatcacacaattgaactgtaatataaagcatatatttaAAGGAAGAAATGCAGATATATGAATATTGATTTGTATAGTATACCCACATGAGAGCTAGCACTGTATGGactatagtatatatatatagagagagaatgaaagtaCAACAATCACACAGTAACACATTCAGTAGTCAGGGCTGCAAGATAAAACAGCAACATGATATAGATTATCCAGGGAAGTGAGGATAACACTTGAGGATGGAGCTGCCATCTGTGTTGACTCTGAGCTCGGTTCATGAGCACAGTGTCTGCGTCTGCCACAGgccttaaaaacacagacactacCGACACCGATGAAATAGTTCACAGGGCATTATCAGATTCAGTGCTGTCCCCCAGCTGTTAACAAGGCCTGCACTCAGGGGACAGTCACACGTCAACCTTTCAAAGCTTTTATAATGCTACAGATGTCACTCGATGGAGCCACTGACTCAGCAAATGCGCCGAATTGAATCGATTGGGGTTTATGTCATTGTGCTGTGTTTCCCCCCATGCCCGTGAACTGAAACAGGTGACTATGTTGGTCACAATTCAAAAAAACAAGtggaatgaaagaaaatactCAGTGAATTAACACTCAGCAATCTGCTCGACCCATATAACCTCGTCTGGCAGATAAGATGTGGCCTGAAAAAGGGAAGGTGATGTGCCTTGTTTGTCAATTTGCACACCACTGACAAGTCTTACCTCCCTTTAAAGCGGTGATTCTCAACTACCCCAGTGGTTTTGTTGCAACcgagttctcaattacttaattgaacactgaATTAATAACTTCCTAAATCACACAgccttgtaattattttaaacagttgggtttttaagttaagtataaagtTGTAAAAGGAACATatcttattaaagaaccaactttttatcagttacacaattaaaacaattcaaatataagctaattattacttcaatgaagggttcaattaagtaattgagagttctgttggaacagaaaccagcagggtaggggctcctccaggagcagggttgagaaccactgctttaaaagATATCTGtagcttgacttttttttttaaagacattgaaGTCCAGAATGCCTGCCTTCTCATGTTCAACTTCATGCCACATATATAATGGTTgcagttttttaaatgctacaaTTCAACACCGTCCTAGAAATGCACTGCTCTCTGACTCATGCGTGAACAGGCCCCTGTGTGACGCTGACGATGCAAATGGTCAATTCAACAAGACAGCTAAGCCACCGGACCCACAGAATCCCTACATCCCAATCTTGTTTATTTAACTCTTCGGTTATCTAGTTAATTGAACTGTTAGTTGCTCATTGAATTGTTACTTGCTAATTGAAATTTTAATTGCTAAATTAACTGTTTTACAAAACCCGGCCCGATCATCAGTCACGggctgatttttttaatttgttgaacACTTTCACTGATCCCTCAGAAGTCATGATGTCAGTTTGAAGTCTTGTTCCTCGTTCTGAGCTCTCTCCCCTCAGATTCTGGCATCTCCAGCCCCACGTGGTCTATTTTGAGACGTGCTTTGTGTGAAGACAGTTTTAGGCAGTGGCTGTTAAATAGTGAGACTGGGTGGGCAGGCACCAGTGATCAGGAGAACTGACCGAGAACCTCCCCTTCCTGAGAGAGTTACTGTACTGCAGGCCCCGGTGGTTCctaaccctgctcctggaggaccccgtatcctgctggtttttgtgccaaccgagctctcaattacttaattgaacccataTTTGAACTCATAATTTCACAAATCAgtcttttaatcatttttaacagtaggggttttaagtgaagtatataattgtataaataacttattaaagaaccaactcttctattacactatttaaaatgttaaaatctaagcagatttttacttcaattagggtccaattaagtaattggttGGTTGGTTCtgggaacccctgctgtagGTGACTGGCTGGCTCctattaatatttgcatttttgccAGTAATACAGCTCTCTCACCTCTGTGTAACAATTAACCCCTGTATCTACTCAGTTAATCATATTTAGTCACATTATCACACCTCAGAGATGCACAGCTGAAAGCCGCCCCCACCTCAGTGCTcctatatgtttgttttgcagtgcaCAATTTGTGGTTCTGGTTTCCGGGTTCAGTCTTACTAGcagcccccccacctctctATTGTGGTTGCATGATTCAACATTACACAGAAAACCCAACTTCCACCTAAGAGGCACAATCTGACtgaggtttcatttcagaactatttatttttgtaaagggGGAATTTGCAATTGGCCCATTGCCAAGTACAGCCCAGGTCCGGTCAGCGCAGCTACCTTACTACACTTACTGTCAGCACTTTGAACCTGCCCAATCTAAGCTTTGCTACACTGGACCATGGGGAAATACCATCCAGCGCCAATGTGAAAGATACACCCCCCTCCGTTATTACTAAGAGCAAACAGCAATAACTGTGTAGATCTGATTGATTTTGCAGATAACACACCGGTGCAGTAAGTCTCCTGTCTGTTTTTACACTTCGGCCCAAAGTAGCACACTGATCGATTTCAGATGCAAAAAACACTCTCAATGGCACACATTTGCCACTTGCACGCATCTGGCCTTTGTGAAGTAATCACCAGCGACGTGCCTTGTTCGAATCCGCTCGTTTCGGCCTGCCAGTAGGAAGGCAGACAGAGCTCTCCTGGGGACAGGGGTGATCTTTTCATGAGAGCCAGTTTGTAGGGCAATAGCTTGAGTTCGGTTTCGGCTTGGTTGTGGTCCCCCCATGATGGTTATGTGTCACACGTTATCCCCCTAAATTACAGCAGACTCCTCATAGACAAATATTAGGGACATGGACAATATTAGCCAGATCTAAACCCCTTGTCTGAGAGCTGCTTTCATCCCTGTGACCTgtaacttgttttaatttttctgtcTGTACAGTGGTTTGAGAATCTTGGCACCATGTTAAATGAAGCAAagtaaacacataaaataagcaatacaattcaatattaataataatatcattctTGATAAGATCTCTAAGGCATGTTGACTATGGCAGCCCAGGGCTAATTGAGGTTTAACTTCTTTAAGGGAGTGGTTGTGGTGACTGCTTGGGTGCAGTGTGACGGTGCTGTTCACGTGTGCAGTTGCCTCTCAGACAGTCCTGTCCTCTCACCGTGTGGCTTTCCTCATGCGAACTGTAAGGCAGGACAGAAAGGGAATTCGACTCAAGATGAAGCTggcccagtccagtccagtccagtctggtCTGGTCTGGTCTTGTCCAGTGCAGTCTCTTGGTCAGGGAAGGCAGGTCTGGTTCTTGAAGGGGAATCAAGCTGCTGTTTGCAAGTAAGCCTGTTGTTCGAAATCTCTAAATGCCGGGCCAAACAACACTATGTACAACACCACTATGTTGCTGATACTGGAAGCCTGTTTTCGGTGGGGTCTCTGAGCAATTGACAATGTAGGACAGAAAAGCCGCATGAAGGGCAGAATCACACCACAGACGCCCAAATATCACAGCCA

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119800 True 3788 lncRNA 0.42 2 4251663 4255472

Neighbor

gene id symbol gene type direction distance location
AMCG00015184 NA coding upstream 32751 4215744 ~ 4218912 (+)
AMCG00015183 hsc70,LOC108441346,LOC103045816,LOC108241987,LOC107675864,LOC107745199 coding upstream 37834 4198486 ~ 4213829 (+)
AMCG00015185 NA coding upstream 54738 4188467 ~ 4196925 (+)
AMCG00015176 NA coding upstream 139519 4070082 ~ 4112144 (+)
AMCG00015172 NA coding upstream 349325 3894791 ~ 3902338 (+)
AMCG00015190 NA coding downstream 46163 4301635 ~ 4304037 (+)
AMCG00015189 NA coding downstream 50416 4305888 ~ 4363707 (+)
AMCG00015196 NA coding downstream 337501 4592973 ~ 4599435 (+)
AMCG00015198 NA coding downstream 346789 4602261 ~ 4619280 (+)
AMCG00015200 NA coding downstream 488025 4743497 ~ 4765459 (+)
G95977 NA non-coding upstream 380329 3871078 ~ 3871334 (+)
G95972 LOC103376870 non-coding upstream 440603 3810565 ~ 3811060 (+)
G95964 NA non-coding upstream 579993 3671389 ~ 3671670 (+)
G95950 NA non-coding upstream 650278 3601129 ~ 3601385 (+)
G95944 NA non-coding upstream 713327 3538132 ~ 3538336 (+)
G96060 NA non-coding downstream 37587 4293059 ~ 4296312 (+)
G96072 NA non-coding downstream 44434 4299906 ~ 4300232 (+)
G96083 NA non-coding downstream 132676 4388148 ~ 4393469 (+)
G96203 NA non-coding downstream 412850 4668322 ~ 4668784 (+)
G96204 NA non-coding downstream 413421 4668893 ~ 4669390 (+)
G96030 NA other upstream 151523 4089201 ~ 4100140 (+)
G95992 NA other upstream 279980 3969829 ~ 3971683 (+)
AMCG00015173 NA other upstream 302243 3933916 ~ 3949420 (+)
AMCG00015170 NA other upstream 334929 3903699 ~ 3916734 (+)
G95955 NA other upstream 609463 3641940 ~ 3642200 (+)
AMCG00015197 NA other downstream 328225 4583697 ~ 4667058 (+)
G96264 NA other downstream 620649 4876121 ~ 4879896 (+)
G96317 LOC100846954,LOC107575789 other downstream 765894 5021366 ~ 5022052 (+)
AMCG00015212 NA other downstream 812575 5068047 ~ 5077903 (+)
AMCG00015215 NA other downstream 829102 5084574 ~ 5119401 (+)

Expression


Co-expression Network