G96072


Basic Information

Item Value
gene id G96072
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4299906 ~ 4300232 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119812
CCGCAGTGTCGTCGCTCCGCCGCCTCCGGGTGCTTTCCTAATTGAATCCCATTCAAATCGCCACAATCATTCAAACGGAGAAACGGACACTTTTCTTACATGTCCTGGACGTCTCTGTCGGGAATACGCTCCGTCTCcgctgagggggaggggggtcaaaaggcagagaaacaaaaggaaaagagaaaaacgaGAAGCATCCAAAACAAGCCCTCGCTACTTTGATTTCCACAGTTCCGCTTCCGCGGTCTGCGCCGCGGTGCTCGCTGGGATATGTAGTGTGAAGACACGTCTCCTCTTCTCCTGGCCGTGCGCAGTGCATTCTGG

Function

GO:

id name namespace
GO:0051246 regulation of protein metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119812 True 327 lncRNA 0.54 1 4299906 4300232

Neighbor

gene id symbol gene type direction distance location
AMCG00015184 NA coding upstream 80994 4215744 ~ 4218912 (+)
AMCG00015183 hsc70,LOC108441346,LOC103045816,LOC108241987,LOC107675864,LOC107745199 coding upstream 86077 4198486 ~ 4213829 (+)
AMCG00015185 NA coding upstream 102981 4188467 ~ 4196925 (+)
AMCG00015176 NA coding upstream 187762 4070082 ~ 4112144 (+)
AMCG00015172 NA coding upstream 397568 3894791 ~ 3902338 (+)
AMCG00015190 NA coding downstream 1403 4301635 ~ 4304037 (+)
AMCG00015189 NA coding downstream 5656 4305888 ~ 4363707 (+)
AMCG00015196 NA coding downstream 292741 4592973 ~ 4599435 (+)
AMCG00015198 NA coding downstream 302029 4602261 ~ 4619280 (+)
AMCG00015200 NA coding downstream 443265 4743497 ~ 4765459 (+)
G96061 NA non-coding upstream 406 4244387 ~ 4299500 (+)
G96060 NA non-coding upstream 3594 4293059 ~ 4296312 (+)
G96059 NA non-coding upstream 16074 4234671 ~ 4283832 (+)
G96063 NA non-coding upstream 44434 4251663 ~ 4255472 (+)
G95977 NA non-coding upstream 428572 3871078 ~ 3871334 (+)
G96083 NA non-coding downstream 87916 4388148 ~ 4393469 (+)
G96203 NA non-coding downstream 368090 4668322 ~ 4668784 (+)
G96204 NA non-coding downstream 368661 4668893 ~ 4669390 (+)
G96205 NA non-coding downstream 369240 4669472 ~ 4670175 (+)
G96326 NA non-coding downstream 735806 5036038 ~ 5036271 (+)
G96030 NA other upstream 199766 4089201 ~ 4100140 (+)
G95992 NA other upstream 328223 3969829 ~ 3971683 (+)
AMCG00015173 NA other upstream 350486 3933916 ~ 3949420 (+)
AMCG00015170 NA other upstream 383172 3903699 ~ 3916734 (+)
G95955 NA other upstream 657706 3641940 ~ 3642200 (+)
AMCG00015197 NA other downstream 283465 4583697 ~ 4667058 (+)
G96264 NA other downstream 575889 4876121 ~ 4879896 (+)
G96317 LOC100846954,LOC107575789 other downstream 721134 5021366 ~ 5022052 (+)
AMCG00015212 NA other downstream 767815 5068047 ~ 5077903 (+)
AMCG00015215 NA other downstream 784342 5084574 ~ 5119401 (+)

Expression


Co-expression Network