G96110 (ctrl,LOC103045314,LOC108277669,LOC108441368,LOC107745200,LOC102296088)


Basic Information

Item Value
gene id G96110
gene name ctrl,LOC103045314,LOC108277669,LOC108441368,LOC107745200,LOC102296088
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4215727 ~ 4216894 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119860
GGGCTGCAGTCACCACCCAGTACTGGTTGATTAAGGATCCGCCGCAGAAATGGAAACCAGTGGAGTCCTGCAGAGACACCTGCCAGGGCCAAGACCCAGGCACCGCATTCTCTCCATTCACAATCTTATTATAGCCACTGATCACCGGCTTGATACTGGGCACTCCACAACcCAACGCAGAGCCCACCAGGGCCAAACAGCACACAAGCCACAGCATTCTTCTGtttatctctc

Function

symbol description
ctrl Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Is expressed in exocrine pancreas and pancreas. Orthologous to human CTRL (chymotrypsin like).

NR:

description
chymotrypsin-like protease CTRL-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119860 True 234 lncRNA 0.54 3 4215727 4216894

Neighbor

gene id symbol gene type direction distance location
AMCG00015188 LOC104961374 coding downstream 6198 4206275 ~ 4209529 (-)
AMCG00015177 NA coding downstream 31208 4181952 ~ 4184519 (-)
AMCG00015179 NA coding downstream 46711 4167361 ~ 4169016 (-)
AMCG00015181 NA coding downstream 51738 4131402 ~ 4163989 (-)
AMCG00015178 NA coding downstream 176511 4037418 ~ 4039216 (-)
AMCG00015186 NA coding upstream 39373 4256267 ~ 4257343 (-)
AMCG00015187 NA coding upstream 58876 4275770 ~ 4281629 (-)
AMCG00015192 NA coding upstream 73703 4290597 ~ 4293297 (-)
AMCG00015191 psenen coding upstream 78539 4295433 ~ 4300203 (-)
AMCG00015194 NA coding upstream 148542 4365436 ~ 4371175 (-)
G96010 NA non-coding downstream 176509 3903697 ~ 4039218 (-)
G96009 NA non-coding downstream 178556 3901812 ~ 4037171 (-)
G96018 NA non-coding downstream 244971 3969818 ~ 3970756 (-)
G95978 NA non-coding downstream 344393 3871076 ~ 3871334 (-)
G95968 NA non-coding downstream 485408 3729999 ~ 3730319 (-)
G96115 NA non-coding upstream 34988 4251882 ~ 4255484 (-)
G96125 NA non-coding upstream 84738 4301632 ~ 4301940 (-)
G96127 NA non-coding upstream 97799 4314693 ~ 4314916 (-)
G96128 NA non-coding upstream 99303 4316197 ~ 4316936 (-)
G96130 NA non-coding upstream 104144 4321038 ~ 4321271 (-)
G96094 NA other downstream 35286 4174879 ~ 4180441 (-)
AMCG00015180 NA other downstream 91764 4110319 ~ 4123963 (-)
AMCG00015164 NA other downstream 608535 3603683 ~ 3607192 (-)
G95921 NA other downstream 865285 3349879 ~ 3350442 (-)
G95854 NA other downstream 1018538 3196421 ~ 3197189 (-)
G96191 NA other upstream 400817 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 561499 4778393 ~ 4802904 (-)
AMCG00015210 NA other upstream 751156 4968050 ~ 4976350 (-)
AMCG00015211 NA other upstream 768678 4985572 ~ 5083187 (-)
AMCG00015230 NA other upstream 1177492 5394386 ~ 5463028 (-)

Expression


Co-expression Network