G96115


Basic Information

Item Value
gene id G96115
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4251882 ~ 4255484 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119865
GTGATGTTTGTGTGGCTGTGATATTTGGGCGTCTGTGGTGTGATTCTGCCCTTCATGCGGCTTTTCTGTCCTACATTGTCAATTGCTCAGAGACCCCACCGAAAACAGGCTTCCAGTATCAGCAACATAGTGGTGTTGTACATAGTGTTGTTTGGCCCGGCATTTAGAGATTTCGAACAACAGGCTTACTTGCAAACAGCAGCTTGATTCCCCTTCAAGAACCAGACCTGCCTTCCCTGACCAAGAGACTGCACTGGACAAGACCAGACCAGaccagactggactggactggactgggccAGCTTCATCTTGAGTCGAATTCCCTTTCTGTCCTGCCTTACAGTTCGCATGAGGAAAGCCACACGGTGAGAGGACAGGACTGTCTGAGAGGCAACTGCACACGTGAACAGCACCGTCACACTGCACCCAAGCAGTCACCACAACCACTCCCTTAAAGAAGTTAAACCTCAATTAGCCCTGGGCTGCCATAGTCAACATGCCTTAGAGATCTTATCAagaatgatattattattaatattgaattgtattgcttattttatgtgtttactTTGCTTCATTTAACATGGTGCCAAGATTCTCAAACCACTGTACAgacagaaaaattaaaacaagttacAGGTCACAGGGATGAAAGCAGCTCTCAGACAAGGGGTTTAGATCTGGCTAATATTGTCCATGTCCCTAATATTTGTCTATGAGGAGTCTGCTGTAATTTAGGGGGATAACGTGTGACACATAACCATCATGGGGGGACCACAACCAAGCCGAAACCGAACTCAAGCTATTGCCCTACAAACTGGCTCTCATGAAAAGATCACCCCTGTCCCCAGGAGAGCTCTGTCTGCCTTCCTACTGGCAGGCCGAAACGAGCGGATTCGAACAAGGCACGTCGCTGGTGATTACTTCACAAAGGCCAGATGCGTGCAAGTGGCAAATGTGTGCCATTGAGAGTGTTTTTTGCATCTGAAATCGATCAGTGTGCTACTTTGGGCCGAAGTGTAAAAACAGACAGGAGACTTACTGCACCGGTGTGTTATCTGCAAAATCAATCAGATCTACACAGTTATTGCTGTTTGCTCTTAGTAATAACGGAGGGGGGTGTATCTTTCACATTGGCGCTGGATGGTATTTCCCCATGGTCCAGTGTAGCAAAGCTTAGATTGGGCAGGTTCAAAGTGCTGACAGTAAGTGTAGTAAGGTAGCTGCGCTGACCGGACCTGGGCTGTACTTGGCAATGGGCCAATTGCAAATTCCccctttacaaaaataaatagttctgaaatgaaacctcaGTCAGATTGTGCCTCTTAGGTGGAAGTTGGGTTTTCTGTGTAATGTTGAATCATGCAACCACAATagagaggtgggggggctgCTAGTAAGACTGAACCCGGAAACCAGAACCACAAATTGtgcactgcaaaacaaacatataggAGCACTGAGGTGGGGGCGGCTTTCAGCTGTGCATCTCTGAGGTGTGATAATGTGACTAAATATGATTAACTGAGTAGATACAGGGGTTAATTGTTACACAGAGGTGAGAGAGCTGTATTACTggcaaaaatgcaaatattaatagGAGCCAGCCAGTCACctacagcaggggttcccaGAACCAACCaaccaattacttaattggaccctaattgaagtaaaaatctgcttagattttaacattttaaatagtgtaatagaagagttggttctttaataagttatttatacaattatatacttcacttaaaacccctactgttaaaaatgattaaaagacTGATTTGTGAAATTATGAGTTCAAAtatgggttcaattaagtaattgagagctcggttggcacaaaaaccagcaggatacggggtcctccaggagcagggttagGAACCACCGGGGCCTGCAGTACAGTAACTCTCTCAGGAAGGGGAGGTTCTCGGTCAGTTCTCCTGATCACTGGTGCCTGCCCACCCAGTCTCACTATTTAACAGCCACTGCCTAAAACTGTCTTCACACAAAGCACGTCTCAAAATAGACCACGTGGGGCTGGAGATGCCAGAATCTGAGGGGAGAGAGCTCAGAACGAGGAACAAGACTTCAAACTGACATCATGACTTCTGAGGGATCAGTGAAAGTgttcaacaaattaaaaaaatcagccCGTGACTGATGATCGGGCCGGGTTTTGTAAAACAGTTAATTTAGCAATTAAAATTTCAATTAGCAAGTAACAATTCAATGAGCAACTAACAGTTCAATTAACTAGATAACCGAAGAGTTAAATAAACAAGATTGGGATGTAGGGATTCTGTGGGTCCGGTGGCTTAGCTGTCTTGTTGAATTGACCATTTGCATCGTCAGCGTCACACAGGGGCCTGTTCACGCATGAGTCAGAGAGCAGTGCATTTCTAGGACGGTGTTGAAttgtagcatttaaaaaactgcAACCATTATATATGTGGCATGAAGTTGAACATGAGAAGGCAGGCATTCTGGACttcaatgtctttaaaaaaaaaagtcaagctaCAGATATcttttaaagcagtggttctcaaccctgctcctggaggagcccctaccctgctggtttctgttccaacagaactctcaattacttaattgaacccttcattgaagtaataattagcttatatttgaattgttttaattgtgtaactgataaaaagttggttctttaataagatATGTTCCTTTTACAactttatacttaacttaaaaacccaactgtttaaaataattacaaggcTGTGTGATTTAGGAAGTTATTAATtcagtgttcaattaagtaattgagaactcgGTTGCAACAAAACCACTGGGGTAGTTGAGAATCACCGCTTTAAAGGGAGGTAAGACTTGTCAGTGGTGTGCAAATTGACAAACAAGGCACATCACCTTCCCTTTTTCAGGCCACATCTTATCTGCCAGACGAGGTTATATGGGTCGAGCAGATTGCTGAGTGTTAATTCACTGagtattttctttcattccaCTTGTTTTTTTGAATTGTGACCAACATAGTCACCTGTTTCAGTTCACGGGCATGGGGGGAAACACAGCACAATGACATAAACCCCAATCGATTCAATTCGGCGCATTTGCTGAGTCAGTGGCTCCATCGAGTGACATCTGTAGCATTATAAAAGCTTTGAAAGGTTGACGTGTGACTGTCCCCTGAGTGCAGGCCTTGTTAACAGCTGGGGGACAGCACTGAATCTGATAATGCCCTGTGAACTATTTCATCGGTGTCGgtagtgtctgtgtttttaaggcCTGTGGCAGACGCAGACACTGTGCTCATGAACCGAGCTCAGAGTCAACACAGATGGCAGCTCCATCCTCAAGTGTTATCCTCACTTCCCTGGATAATCTATATCATGTTGCTGTTTTATCTTGCAGCCCTGACTACTGAATGTGTTACTGTGTGATTGTTGtactttcattctctctctatatatatatactatagtCCATACAGTGCTAGCTCTCATGTGGGTATACTATACAAATCAATATTCATATATCTGCATTTCTTCCTTtaa

Function

NR:

description
PREDICTED: protein piccolo-like

GO: NA

KEGG:

id description
ko05100 Bacterial invasion of epithelial cells

RNA

RNA id representative length rna type GC content exon number start site end site
TU119865 True 3581 lncRNA 0.43 2 4251882 4255484

Neighbor

gene id symbol gene type direction distance location
AMCG00015188 LOC104961374 coding downstream 42353 4206275 ~ 4209529 (-)
AMCG00015177 NA coding downstream 67363 4181952 ~ 4184519 (-)
AMCG00015179 NA coding downstream 82866 4167361 ~ 4169016 (-)
AMCG00015181 NA coding downstream 87893 4131402 ~ 4163989 (-)
AMCG00015178 NA coding downstream 212666 4037418 ~ 4039216 (-)
AMCG00015186 NA coding upstream 783 4256267 ~ 4257343 (-)
AMCG00015187 NA coding upstream 20286 4275770 ~ 4281629 (-)
AMCG00015192 NA coding upstream 35113 4290597 ~ 4293297 (-)
AMCG00015191 psenen coding upstream 39949 4295433 ~ 4300203 (-)
AMCG00015194 NA coding upstream 109952 4365436 ~ 4371175 (-)
G96110 ctrl,LOC103045314,LOC108277669,LOC108441368,LOC107745200,LOC102296088 non-coding downstream 34988 4215727 ~ 4216894 (-)
G96010 NA non-coding downstream 212664 3903697 ~ 4039218 (-)
G96009 NA non-coding downstream 214711 3901812 ~ 4037171 (-)
G96018 NA non-coding downstream 281126 3969818 ~ 3970756 (-)
G95978 NA non-coding downstream 380548 3871076 ~ 3871334 (-)
G96125 NA non-coding upstream 46148 4301632 ~ 4301940 (-)
G96127 NA non-coding upstream 59209 4314693 ~ 4314916 (-)
G96128 NA non-coding upstream 60713 4316197 ~ 4316936 (-)
G96130 NA non-coding upstream 65554 4321038 ~ 4321271 (-)
G96131 NA non-coding upstream 73612 4329096 ~ 4329398 (-)
G96094 NA other downstream 71441 4174879 ~ 4180441 (-)
AMCG00015180 NA other downstream 127919 4110319 ~ 4123963 (-)
AMCG00015164 NA other downstream 644690 3603683 ~ 3607192 (-)
G95921 NA other downstream 901440 3349879 ~ 3350442 (-)
G95854 NA other downstream 1054693 3196421 ~ 3197189 (-)
G96191 NA other upstream 362227 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 522909 4778393 ~ 4802904 (-)
AMCG00015210 NA other upstream 712566 4968050 ~ 4976350 (-)
AMCG00015211 NA other upstream 730088 4985572 ~ 5083187 (-)
AMCG00015230 NA other upstream 1138902 5394386 ~ 5463028 (-)

Expression


Co-expression Network