G96127


Basic Information

Item Value
gene id G96127
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4314693 ~ 4314916 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119878
CTGGCTGGATTTGAGCTGCTTCTGCTGGTCGATCTTGATGAGCTGCACCTTGGCTCTCTTCAGCAGGTGGAACATCCTCTTGTTGGCGCCGGTGAGCCGGATGCGGTGAGCAGTGCCCCTCTCCTCCACCACTACACGGTCGCTCTCCGTGCTCTGGTCAAGGTCAGGCTCACCCTCTCTGGGCCCCGGCCTCGCAGCCGTCTTCCCAAGCTCCCCGTCTTCCA

Function

GO:

id name namespace
GO:0050780 dopamine receptor binding molecular_function
GO:0001664 G protein-coupled receptor binding molecular_function
GO:0031752 D5 dopamine receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119878 True 224 lncRNA 0.63 1 4314693 4314916

Neighbor

gene id symbol gene type direction distance location
AMCG00015191 psenen coding downstream 14490 4295433 ~ 4300203 (-)
AMCG00015192 NA coding downstream 21396 4290597 ~ 4293297 (-)
AMCG00015187 NA coding downstream 33064 4275770 ~ 4281629 (-)
AMCG00015186 NA coding downstream 57350 4256267 ~ 4257343 (-)
AMCG00015188 LOC104961374 coding downstream 105164 4206275 ~ 4209529 (-)
AMCG00015194 NA coding upstream 50520 4365436 ~ 4371175 (-)
AMCG00015193 NA coding upstream 93569 4408485 ~ 4424905 (-)
AMCG00015195 NA coding upstream 121629 4436545 ~ 4452947 (-)
AMCG00015199 NA coding upstream 304448 4619364 ~ 4630222 (-)
AMCG00015202 LOC106605622 coding upstream 355788 4670704 ~ 4679051 (-)
G96125 NA non-coding downstream 12753 4301632 ~ 4301940 (-)
G96115 NA non-coding downstream 59209 4251882 ~ 4255484 (-)
G96110 ctrl,LOC103045314,LOC108277669,LOC108441368,LOC107745200,LOC102296088 non-coding downstream 97799 4215727 ~ 4216894 (-)
G96010 NA non-coding downstream 275475 3903697 ~ 4039218 (-)
G96009 NA non-coding downstream 277522 3901812 ~ 4037171 (-)
G96128 NA non-coding upstream 1281 4316197 ~ 4316936 (-)
G96130 NA non-coding upstream 6122 4321038 ~ 4321271 (-)
G96131 NA non-coding upstream 14180 4329096 ~ 4329398 (-)
G96132 NA non-coding upstream 14694 4329610 ~ 4329809 (-)
G96133 NA non-coding upstream 17599 4332515 ~ 4332772 (-)
G96094 NA other downstream 134252 4174879 ~ 4180441 (-)
AMCG00015180 NA other downstream 190730 4110319 ~ 4123963 (-)
AMCG00015164 NA other downstream 707501 3603683 ~ 3607192 (-)
G95921 NA other downstream 964251 3349879 ~ 3350442 (-)
G95854 NA other downstream 1117504 3196421 ~ 3197189 (-)
G96191 NA other upstream 302795 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 463477 4778393 ~ 4802904 (-)
AMCG00015210 NA other upstream 653134 4968050 ~ 4976350 (-)
AMCG00015211 NA other upstream 670656 4985572 ~ 5083187 (-)
AMCG00015230 NA other upstream 1079470 5394386 ~ 5463028 (-)

Expression


Co-expression Network